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berkeley_reactor_200306_biofilm_scaffold_5879_31

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 34266..35120

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0L4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 26.7
  • Coverage: 251.0
  • Bit_score: 139
  • Evalue 3.80e-30
binding--dependent transport system inner membrane component family protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 273.0
  • Bit_score: 280
  • Evalue 3.00e-73
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AJZ61972.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 273.0
  • Bit_score: 280
  • Evalue 1.50e-72

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Taxonomy

Burkholderia fungorum → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGACATCGGCTGTCCGACCGGAAATGCGGTCCGCACCACGGGCGACGCTCCTCTCCCGCTTGAGGACCGCGCTGGCGGTCCTCGATCCCCTGCGGATCGCCGGCGTGGTGCTGTTCATCGCGGTGTGGCAGATGCTGACGCTCGGCCTGCCGCCGATCATCCTGCCGACGCCGCTGGGCGTGCTGCAGCGCGTCTTCTCCGATTTCCTGTCGGCGCCGGCCCTGTCCTATTACGGGGTCAGCGAGGCCAATCTCTACGGCAACCTGATCTACACCGCCGAGAACGTCGCCATGGCTGTCGCGGTCGGCTCGGTGATCGGCGTTCTCGCCGGGCTGGTGTCGGCCCGCTTCGGCCTGGTCCGCGCCGTCATCGATCCCGTCGTCATGACCGCCGGCACCGTGCCGATCCTCGTCGCCGCGCCCTTTCTGCTGATTTGGTTCGGCGTCGGGCGCGCCAGCGCGGTCTGCCTGGTCATCTTCTATGTCGTGGTCATCCTCTACGTCTGCGCGCAGCGGGCCGCGACCAATCTGGACCCGGTCTACGAGGACAATGCCCGCACGCTCGGCGCGACGCCGCGCCGGATGGTCCGCGACATCCTCATCCCCGCCACCGTCCCCGAGATCCTCGGCGGCCTCAGGATCGCGCTGGCCGGCGCCTGGGGCCTGGAGGCCATCGCCGAGCTGCTCGGCTCGCAATCGGGCATCGGCAAGGTCCTCGAAGTGCTGGCCGGCGCCACCGATCCCCAGGGCATCATGGCGACGCTCCTGGTGCTCGGGCTGACCGCCATCGTCGTCGACGGGCTCGCCGCCTTCGCCATCGCCCGCACCGCCCAGTGGAGCGCTCCGGCGCGCTAG
PROTEIN sequence
Length: 285
MTSAVRPEMRSAPRATLLSRLRTALAVLDPLRIAGVVLFIAVWQMLTLGLPPIILPTPLGVLQRVFSDFLSAPALSYYGVSEANLYGNLIYTAENVAMAVAVGSVIGVLAGLVSARFGLVRAVIDPVVMTAGTVPILVAAPFLLIWFGVGRASAVCLVIFYVVVILYVCAQRAATNLDPVYEDNARTLGATPRRMVRDILIPATVPEILGGLRIALAGAWGLEAIAELLGSQSGIGKVLEVLAGATDPQGIMATLLVLGLTAIVVDGLAAFAIARTAQWSAPAR*