ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_5879_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 35130..35960

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00036209D1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 256.0
  • Bit_score: 230
  • Evalue 1.20e-57
ABC transporter family protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 252.0
  • Bit_score: 345
  • Evalue 9.60e-93
ABC transporter family protein {ECO:0000313|EMBL:AJZ64032.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 252.0
  • Bit_score: 345
  • Evalue 4.80e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia fungorum → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCCCAATTCCGCCAAGTCCCGCATGATCGAGCTCGTGCATGTCAGCCGCTCCTTCAGGCGCGCGGACGGCCAGGTGGTGAAGGCCGTCGACGACATCTCGCTTCTCGTCGGCGAGGGCGAGTTCGTCTGCCTCGTCGGCCCGTCCGGCTGCGGCAAGAGCACCTTGCTTCAGATGGTGGCGGGGCTGCTCGACCCCTCGCATGGCCAGATCGCCGTGGCGGGCAAGGAGATCTCGGGGCCGGGCCGCGAGCGCGGCATGGTGTTCCAGAAGGACAGCGTGTTTCCCTGGATGCGCGTCATCGACAATGTCGAATATGGCCTGAGATGCCGGGGGATCCCGGCCGCCCGGCGGCGCGACATCGCCAGGCTCTACCTCGAGCGCGTCGGCCTCGCCCATGTCGAGCGGGCCTGGCCGCGCGAATTGTCCGGCGGCATGCTCAAGCGGGTGGCGATCGCCACGGTGTTCGCCAATGGCGGCAGCGTCCTGCTGCTCGACGAGCCGTTCGGCGCGCTCGACTATGTCACGCGCCACCAGCTGCAATCGGTCCTGCTCGACCTCTGGGACGAAGGCGGCGCGGCGGCGCGGCGCACCGTCCTGTTCGTCACTCATGACGTCGACGAGGCGCTGGCGCTGGCCGACCGCATCCTGGTGTTTCACAGCGGGCGGCAGGTCGACGATCTCTCGGTCACGACAGAGCGGCCGCGCACCACCGACAGCCTGCTGCTGCCGGAGATGGTCGGGATCAAGCACGCTCTGCTGGCCCATCTCGGCCTCGAACGCCGGCCGGCGCCGATGCAGGCGGTCGCCGGCGGGAAGGCCGGATCATGA
PROTEIN sequence
Length: 277
MPNSAKSRMIELVHVSRSFRRADGQVVKAVDDISLLVGEGEFVCLVGPSGCGKSTLLQMVAGLLDPSHGQIAVAGKEISGPGRERGMVFQKDSVFPWMRVIDNVEYGLRCRGIPAARRRDIARLYLERVGLAHVERAWPRELSGGMLKRVAIATVFANGGSVLLLDEPFGALDYVTRHQLQSVLLDLWDEGGAAARRTVLFVTHDVDEALALADRILVFHSGRQVDDLSVTTERPRTTDSLLLPEMVGIKHALLAHLGLERRPAPMQAVAGGKAGS*