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berkeley_reactor_200306_biofilm_scaffold_5879_61

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(59582..60349)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IY31_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 254.0
  • Bit_score: 219
  • Evalue 2.00e-54
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KDR32144.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 252.0
  • Bit_score: 234
  • Evalue 1.10e-58
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 255.0
  • Bit_score: 225
  • Evalue 1.30e-56

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Taxonomy

Burkholderia grimmiae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACTTCGGCTGTTTCGATCGTGACGGGCGGCCGGCGCGGCCTCGGCCGAGCCATTTGCGAGAAGCTGGCGCAAAAGGGGCACAACGTTCTGGTCGTCGATGTCGAACGCGATGCCGCCGCCGACGAGACCGTCGCGCTCTTGAGGCGCAGTGGCGTGAATGCCGACTTTCTTGCGGCGGATGTGGGAGACGAGGCTCTTCACGACGGCATCATCGGCGCTGCCGGGCGACTGGGCACGGTGACGACGCTGGTGAACAACGCCGGCGTCTCCTCGACGGTGCGCGGCGATATGCTCGATCTTCCTGTCGAAAGCCTTGATCGTGCAATTCGTATCAATTTGCGTGCACCATTCCTGCTGAGCCAGAAGTTCGGCCGACATGTGATAAAGACGGGTGCAGCGACCGAGCATTTCTGCTCGATTGTCAATATTACGTCCGTGAACGCAGAGATGATCGGCGTAAACCGCCCCGACTACTGCATCACCAAGACCGGATTGTCCATGGCCACCCGCCTCTTCGCGGCGCGGCTGGCCGAGGAGAAAATCCATGCCTATGAGGTGCGACCCGGCATCATGATGACGGAGATGACCCGGCCTTCCCGGGAGAAATACGACCGCGTCATCGAAGAAGGCCTGGTGCCGATGCGGCGCTGGGGCACCCCCGCCGACGTCGGAGAAGCCGTGGCGGAGCTGGCAACCGGCGCCTTCAAGTTCTCGACGGGGGATGCCGTCTTCGTCGATGGCGGGCTTCACCTCTACAGGCTCTAG
PROTEIN sequence
Length: 256
MTSAVSIVTGGRRGLGRAICEKLAQKGHNVLVVDVERDAAADETVALLRRSGVNADFLAADVGDEALHDGIIGAAGRLGTVTTLVNNAGVSSTVRGDMLDLPVESLDRAIRINLRAPFLLSQKFGRHVIKTGAATEHFCSIVNITSVNAEMIGVNRPDYCITKTGLSMATRLFAARLAEEKIHAYEVRPGIMMTEMTRPSREKYDRVIEEGLVPMRRWGTPADVGEAVAELATGAFKFSTGDAVFVDGGLHLYRL*