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berkeley_reactor_200306_biofilm_scaffold_5879_67

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(66120..66989)

Top 3 Functional Annotations

Value Algorithm Source
endonuclease n=1 Tax=Rhizobium gallicum RepID=UPI00036F4CC2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 268.0
  • Bit_score: 221
  • Evalue 7.70e-55
Endonuclease {ECO:0000313|EMBL:KKB07904.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 273.0
  • Bit_score: 224
  • Evalue 1.70e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 268.0
  • Bit_score: 220
  • Evalue 4.90e-55

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCCAGATTCCGATCGGCGCTTTTCCTTCAATCACGCGACCTTCGGGCCGGATGTCTCATTCCGGCTCTTCCTGGAAGCGGTCAGCCAATCCGGCGCATCGGCTGTAGGGCTTTGGGCTGACCGGCTCGACGGATTGTCTCCACGCGCGGCCGGAGAGGTCGTGCGCAGCCTCGGGCTGGAGATCAGCGGCGTCAGCCGAGGTGGTTTCTTTGCAAGCGCCTCGGAGCGGCAACGCCAGGACGCGATCGATCATACCAGGCGCCAGATCGAGCTGACGGCCGAGCTGCAGGCCGAAACCCTCATTATCGTTCCAGGCGGGCTTTCGAGCGAGCTCCGAGATATCGGCTCGGCGCGCAGAATGGTTGCCGACGGTCTTGGACAAGTCGTCGAATTTGCCCGCGATTGCGGTGTCAAGCTGGCGATCGAGCCGTTTCATCCCGCGCTTTCCGCCATGCGAAGCGTTGTCAACACGCTCGACCTCGCTCTCGATCTCTGCGAAGCCTGCGGTGATCATGTCGGCGTGATCACCGATATTTTCCACATATGGTGGGATCCGAACGTTTACCGGGCGATCGAACGCGCCGGCTCGCGGATCTTCGGCCATCACCTCTGCGACTGGAGGCTCGATACGATCGATCCCATTGCCGACCGCGGTGTGATGGGCGATGGCGTGGCGAATGTTTCGCGCCTCACGGCGGCAGTGCTGCAGACGGGCTACGACGGGTGGATGGAAATCGAGATCTTTTCGCGCAATGATTTGTGGACGATGGACGCCAGAGCGATCACTGCGCTTTGCCTTGGACGAGCCATGGCCTGTCTGGAGCAAGCAGAGCATCTCAGCAGGGGGGATCGCCTGCGAGACGCGTGA
PROTEIN sequence
Length: 290
MPDSDRRFSFNHATFGPDVSFRLFLEAVSQSGASAVGLWADRLDGLSPRAAGEVVRSLGLEISGVSRGGFFASASERQRQDAIDHTRRQIELTAELQAETLIIVPGGLSSELRDIGSARRMVADGLGQVVEFARDCGVKLAIEPFHPALSAMRSVVNTLDLALDLCEACGDHVGVITDIFHIWWDPNVYRAIERAGSRIFGHHLCDWRLDTIDPIADRGVMGDGVANVSRLTAAVLQTGYDGWMEIEIFSRNDLWTMDARAITALCLGRAMACLEQAEHLSRGDRLRDA*