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berkeley_reactor_200306_biofilm_scaffold_10611_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 16969..17628

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=UPI00036C178B similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 207.0
  • Bit_score: 228
  • Evalue 3.70e-57
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 223
  • Evalue 5.70e-56
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH89125.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 223
  • Evalue 2.80e-55

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGCAAGCTCACCAAGGCGCAGGCCATCCACCAGGCGATCGCCGACGACATCGTGCATGGCCGCCTGCCGCCGGGAGCGCCCCTGGACGAGACGTCGATCGCCGAGGCCTTCGGCGTCTCGCGCACGCCGATCCGCGAGGCGCTGCGCCATCTCGAGGCGATCGGCCTGGTCGAGGCGCGAGCCCGCCGCAGCGCGGTGGTGGCCAGCGTCGGCGACGAGCAGCTCGACGACATGTTCGCGGTCATGGCGGAGCTGGAGGCGCTGTGCGCGCGCTGGTCGGCCCTGACCATGACGGCCGGGGAGCGCCGCGGGCTGGAGGCGATCCAGGAGGCCAGCGGCCGGCTGGTCGTGGCCGGCGACCGCGAAGCCTATATCGAGGCCAACAACCAGTTCCACGAGGCGATCTATCGCGGCGCCCATAACGGCTTCCTGCAGGACCTCACCTTGTCGGTGCGCCAGCGCCTGGCCCCCTTCCGGCGGGCCCAGTTCGAGACGCTCGGGCGCCTGGCCGTGTCGCATCGCGAGCACGGACGGGTGACCACGGCGATCCTGCGCGGCGACGCGGAGAGCGCCGCCCGCGAAATGCGCACCCATCTCGCCGTGGTGCGCAACCGCGTCGACGAGGTCACGCATATGGGCCAGCGCGAGCTGACCTAG
PROTEIN sequence
Length: 220
MGKLTKAQAIHQAIADDIVHGRLPPGAPLDETSIAEAFGVSRTPIREALRHLEAIGLVEARARRSAVVASVGDEQLDDMFAVMAELEALCARWSALTMTAGERRGLEAIQEASGRLVVAGDREAYIEANNQFHEAIYRGAHNGFLQDLTLSVRQRLAPFRRAQFETLGRLAVSHREHGRVTTAILRGDAESAAREMRTHLAVVRNRVDEVTHMGQRELT*