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berkeley_reactor_200306_biofilm_scaffold_10611_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 17932..19038

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 367.0
  • Bit_score: 515
  • Evalue 4.30e-143
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV11134.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 367.0
  • Bit_score: 522
  • Evalue 2.90e-145
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 367.0
  • Bit_score: 515
  • Evalue 1.20e-143

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Taxonomy

Elstera litoralis → Elstera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGATCAGCAACGGTTTATCCCGCCGGCGCTTCCTGCAGGGCACGGCCGCGGGCCTGGCGCTCGGCGCTCTGCCGCTCGGGGCGCGGGCCGCCGCCGACCTGACGGTCGGCGTGGTCTATGTCGGCGCGCGCGACGATTTCGGCTGGAACCAGGCGCATGCGGTGGCGATCGCGGCCCTGAAGGCCGTGCCCGGGGTCAAGGTGGTCGAGGAGGAGAACGTGGCGGAGACGGACGCCGTCTCCAAGTCGATGGAATCGATGATCAACCTCGACGGCGCCAGCCTGATCCTCGCGACCTCCTTCGGCTATTACCAGCCCTTCGTCGTCGACCTCGCCCGCAAATATCCCGACGTCACCTTCCGCCACGCCGCGCCGCTGTGGGACAAGGACAAGGACCCGAAGAACGCCGGCTCCTATTTCGCCTTCCTGGACCAGGCGCACTATATCGACGGCGTCGCGGCCGGCGCCGCCTCCAAGTCCGGCAAGCTCGGCTTCGTCGCCGCCAAGCCGATCGGCGTGGTGCTGCGCAACATCAACTCCTTCCTGGTCGGGGCGCGCAGCGTCAATCCGGCCGCCACCGTGCAGGTGATCTTCACCGGCGACTGGTCGCTGCCGGTGCGCGAGGCCGAGGCCACCAACGCGCTGGTCGATGCGGGCTGCGACCTCATCACCTGCCATGTCGACGGGCCCAAGGTGGTGATCCAGACGGCGGAGGGGCGAGGCGTCAAGACCTGCGGCCATAACGCCTCGCAGGCCCCGCTCGCCCCCAAGGGCTTCGTCACCGGCGCCGAGTACAAGTGGGAGACGATCTACAAGGACTTCGCCGCCAAGCTCGCCAAGGGCGAGAGCCTGCCGAACATCACCTTCGGCGGCTACGACCTCGACATGGTGCAGAACACGCCCTTCGGCGCCGGCGCCGACGAGAAGACCATCAAGGCCGCCACCGACGCCATCGCCGCGCTGAAGGCCAAGGCGCCGATCTTCAAGGGCCCGGTCAAGGACAACAAGGGCAATGTCGTGCTGCCCGACGCCGCCTACGACAACATGGCGCCGGTGCTGAACGGCATGACCTACCTCATCGACGGGGTGATCGGCTCGACGACGTGA
PROTEIN sequence
Length: 369
MISNGLSRRRFLQGTAAGLALGALPLGARAAADLTVGVVYVGARDDFGWNQAHAVAIAALKAVPGVKVVEEENVAETDAVSKSMESMINLDGASLILATSFGYYQPFVVDLARKYPDVTFRHAAPLWDKDKDPKNAGSYFAFLDQAHYIDGVAAGAASKSGKLGFVAAKPIGVVLRNINSFLVGARSVNPAATVQVIFTGDWSLPVREAEATNALVDAGCDLITCHVDGPKVVIQTAEGRGVKTCGHNASQAPLAPKGFVTGAEYKWETIYKDFAAKLAKGESLPNITFGGYDLDMVQNTPFGAGADEKTIKAATDAIAALKAKAPIFKGPVKDNKGNVVLPDAAYDNMAPVLNGMTYLIDGVIGSTT*