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berkeley_reactor_200306_biofilm_scaffold_10611_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19118..20221

Top 3 Functional Annotations

Value Algorithm Source
Probable sugar ABC transporter, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR8_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 367.0
  • Bit_score: 481
  • Evalue 4.00e-133
ABC transporter permease {ECO:0000313|EMBL:KFL32663.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 344.0
  • Bit_score: 490
  • Evalue 1.20e-135
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 367.0
  • Bit_score: 481
  • Evalue 1.10e-133

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGACCGACCTAGCCGGACGTCCCGCCTCCCTCGCCTTCCCGCTGCGGGCCGACATGCTGCCGCGCCTGCGCGCCGGGGCCGAATATATCGCGATTCCCCTGATCGCCCTCGCCGCATCGCTGCTCCTGTTCTCGGCCTTCCTGCTGGCGGTGGGCAAATCGCCGCTGACCTTCGTCGAGCTGGTCTGGACCGGCGGCTACGGCACGGCCTTCTCCTGGCGCAACACGCTGCAGCGTGCCTCGCCGCTGATCTTCACGGCGCTGGCGGTCGCCATTCCGGCCCGGCTCGGCCTGACCATGATCGGCGGGGAGGGAGCGCTGGTGCTGTCGGGCTTTGCCGCGGCGGCCATCGCCGTGCCCTTCGTCGGCAGCGGGGTCTCCGCCGTCCTGGTCATGCCGCTGATGGCGCTGACTGCGATGGTGGTCGGCGGGCTCTGGGTCGGGCTTGCGGGCTACCTGCGCTATGCCCGCGGCGTCAACGAGACGATCGCCTCGCTGCTGCTCTCCTACATCGCCATCGCCATCATGAACTTCTTCGTCGAAGGGGCGATGCGCGACCCCGGCTCGCCGAACAAGGCCTCCACCCTGCCGATCGGCCAGGGCTACATGGTCGGGCCGATGCCCGGGATCGGCGTGCATTGGGGCCTGGCCTTCGGCGTGGTCGCGGCGATCGTGCTCTACATCCTGATGGCGCGCACCACCTTCGGCTTTGCCGCGCGCGTCACCGGCGGCAATGTCCGGGCGGCGCTGGCCCAAGGCCTGCCGGTGGGCAAGCTGATCCTGGTCTGCGCCATGATCGCGGGTGCCTGCGCCGGCCTTGCCGGCTATTTCGAGGTGGCGGCGATCCAGGGCCGGGCCAATGCCTCGCTGGCGGCGGGCTATGGCTTCACCGGCATCCTCGTCGCCTTCCTCGCCCGCCACAATCCGATCGCCATCGTGCCGGTGGCGATCCTGTTCGGCGGGCTCTCGGCGGCGGGCGGCCTGATCCAGCGCCGCATGGGCATGCCGGACGCCACCGTGCTGGTGCTGCAGGGCTTCATCTTCGTGGTGCTGCTGGCGTCCGAGACGCTCTACGGCCGCTTCAAGATCTTCCGGCAGGGGTGA
PROTEIN sequence
Length: 368
MTDLAGRPASLAFPLRADMLPRLRAGAEYIAIPLIALAASLLLFSAFLLAVGKSPLTFVELVWTGGYGTAFSWRNTLQRASPLIFTALAVAIPARLGLTMIGGEGALVLSGFAAAAIAVPFVGSGVSAVLVMPLMALTAMVVGGLWVGLAGYLRYARGVNETIASLLLSYIAIAIMNFFVEGAMRDPGSPNKASTLPIGQGYMVGPMPGIGVHWGLAFGVVAAIVLYILMARTTFGFAARVTGGNVRAALAQGLPVGKLILVCAMIAGACAGLAGYFEVAAIQGRANASLAAGYGFTGILVAFLARHNPIAIVPVAILFGGLSAAGGLIQRRMGMPDATVLVLQGFIFVVLLASETLYGRFKIFRQG*