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berkeley_reactor_200306_biofilm_scaffold_10611_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20226..21143

Top 3 Functional Annotations

Value Algorithm Source
Simple sugar transport system permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR7_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 307.0
  • Bit_score: 461
  • Evalue 4.70e-127
ABC transporter permease {ECO:0000313|EMBL:KKB09631.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 305.0
  • Bit_score: 493
  • Evalue 2.00e-136
Simple sugar transporter permease similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 307.0
  • Bit_score: 461
  • Evalue 1.30e-127

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAACGACGCCCTCGTCACCGTCCTCATCGCCATGATCGGCGGCGCCATCCGCGTCTCGACGCCTTTCGTGTTCGTCGCGCTCGGCGAATGCCTCACCGAGAAATCCGGCCGCATCAATCTCGGCCTGGAGGGCACGCTGGTGCTCGGCGCCATGGTCGGCTACGCCGCCTGCTACGAGAGCGGCTCGCCCTGGCTCGGCGTGCTGGCGGCGGGGCTGGCCGGCACGGTGCTCGGCGCCATGCACGGCTATCTCTGCAAGCTGCCGAAGGTCAACGACATCGCCATCGGCATCGCCATGATGCTGTTCGGCACCGGCTTCGCCTTCTTCTTCGGCAAGGCCTATATCCAGCCGCAGGCGCCGCACCTGCCCTCCATCCCGCTCGGCGGCTGGACCGGCAATCCGCAGCTCCGGGAAGCGCTCCAGGTCAACCCGCTGTTCTTCGTCGGGCTCGCCGCCGCTGTCGGGCTGTGGTGGGCGTTCCGCAACACCCGCTGGGGGCTGGTCGTCCGCATGACCGGCGACAGCGCCGCCGCGGCGCGGGCGATGGGCGTTTCGGTCGACCAGGTGCGCTTCCTGGCGACGGCGGCGGGCGGCTTCCTCGCCGGCATCGGCGGCTCCTTCCTGTCGCTCTCCTATCCCGGCTCCTGGAACGAGGGCCTGTCCTCCGGCCAGGGGCTGATGGCGGTGGCGCTGGTGATCTTCGCGCGCTGGGATCCGGTGCGCTGCTTCCTCGCCGCCATGCTGTTCGGCGCCGCCGGGGCGCTCGGGCCCTCGCTGCAATCGGTCGGCATCACCCAGGGCTACTACCTCTTCAACGCCGCGCCCTACATCCTGACGCTGCTGATCATGATCGGCTCGTCCAATTCCAGCCAGGCGCTGCGCGCGGCGCCGGGCGAACTCTCGATCACCAAATAG
PROTEIN sequence
Length: 306
MNDALVTVLIAMIGGAIRVSTPFVFVALGECLTEKSGRINLGLEGTLVLGAMVGYAACYESGSPWLGVLAAGLAGTVLGAMHGYLCKLPKVNDIAIGIAMMLFGTGFAFFFGKAYIQPQAPHLPSIPLGGWTGNPQLREALQVNPLFFVGLAAAVGLWWAFRNTRWGLVVRMTGDSAAAARAMGVSVDQVRFLATAAGGFLAGIGGSFLSLSYPGSWNEGLSSGQGLMAVALVIFARWDPVRCFLAAMLFGAAGALGPSLQSVGITQGYYLFNAAPYILTLLIMIGSSNSSQALRAAPGELSITK*