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berkeley_reactor_200306_biofilm_scaffold_10611_38

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(38757..40079)

Top 3 Functional Annotations

Value Algorithm Source
4-aminobutyrate aminotransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037851FE similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 441.0
  • Bit_score: 615
  • Evalue 2.80e-173
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KJC41114.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 439.0
  • Bit_score: 622
  • Evalue 4.20e-175
class III aminotransferase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 441.0
  • Bit_score: 609
  • Evalue 5.70e-172

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGCCGGACCAGGACATCCTCGCGCTCAACGCCTTCGATCCCCGCGCCGCCACGGCGATCGGCCAGGCCGTCGAGCGGCGCCTGCGCTCGTTCGGTGCCGGCTCGGTGCTGTTCTACCAGGAGCCGATCGAGATGGTGCGGGCCGAGGGCGTGTGGCTGCACGCCGCCGACGGCCGGCACTATCTCGACGTCTACAACAACGTGCCCTCGGTCGGGCATTGCCATCCCAGGGTGGTCGAGGCCGTCCGCCGGCAGGTCGGCACGCTCAACATCCACACGCGCTACCTCAACGCGGTGGTCGACGCCTATGCCGAGCGCCTGCTGGCGACCTTGCCCGCGGCGATCGACAATCTCGTCCTGACCTGCACCGGCAGCGAGGCCAACGACCTGGCGCTGCGCGTGGCGCGGGCCGCCACCGGCGGCCAGGGCTTCGTCGTCACCCGCACCGCCTATCACGGCAACACCGCTGCGGTGACCGACATCTCGCCCGCCTCGCGTCCGGGCCGGCCGCTGGCGCCGCATGTGCGGGCGGTGGCCCCGCCCGACCTCTATCGCGCGCCCGACCCCGGCGCCCGCCTCGCCGCCGCCGTTGCCGAGGCGGCCGCGGACCTGAAGCAGCGCGGCCTCGGCTTCGCCGGCTTCATCGCCGACAGCGTCTTCTCCAGCGACGGCGTGCATGTCGATCCCGTCGGCCTGCTCGGGCCGGTGGTCGAGGCGGTGCGGGCGGCGAGCGGCCTGTTCATCGCCGACGAGGTGCAGCCCGGTTTCGGACGCACCGGCGCCGCGCTGTGGGGCTTTGCCCGCCACGGCGTCGTTCCGGACATCGTCACGCTCGGCAAGCCGATGGGCAACGGCTTTCCCATGGGCGGCATGGCCCTCAACGCCGACCTCCTCGCCGCCTTCAACGCCGAGGACAAGTATTTCAACACGTTCGGCGGCAACCCGGTCGCCGCCGCCGCGGGCCTCGCCGTGCTCGACGTGATCCGCGACGAGGGCCTGATCGACAATGCCCGCGCCGTCGGCGACCATCTCCTGCAGGGCCTGCGCGAAATCGCCAACGCGCATGTCGCCATCGGCGACGTGCGCGGCGCCGGCCTGTTCATCGGGCTCGAGCTGGTCGCCGACCGTGAGGCCAGGACGCCGGCACCGGCCATCGCCACCGCCGTGATCGAGGGCCTGCGCCGCGAAGGCATCCTGATCGGCGCCGCCGGCCCGCACGGCAGCACGCTGAAGATCCGCCCGCCTCTCTGCTTCTCGCGCGACAACGCCGACCGGGTGGTGGAGGCCTGCGACACCGTGTTGAGGGGGCTGCCGGTCGGCTGA
PROTEIN sequence
Length: 441
MPDQDILALNAFDPRAATAIGQAVERRLRSFGAGSVLFYQEPIEMVRAEGVWLHAADGRHYLDVYNNVPSVGHCHPRVVEAVRRQVGTLNIHTRYLNAVVDAYAERLLATLPAAIDNLVLTCTGSEANDLALRVARAATGGQGFVVTRTAYHGNTAAVTDISPASRPGRPLAPHVRAVAPPDLYRAPDPGARLAAAVAEAAADLKQRGLGFAGFIADSVFSSDGVHVDPVGLLGPVVEAVRAASGLFIADEVQPGFGRTGAALWGFARHGVVPDIVTLGKPMGNGFPMGGMALNADLLAAFNAEDKYFNTFGGNPVAAAAGLAVLDVIRDEGLIDNARAVGDHLLQGLREIANAHVAIGDVRGAGLFIGLELVADREARTPAPAIATAVIEGLRREGILIGAAGPHGSTLKIRPPLCFSRDNADRVVEACDTVLRGLPVG*