ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_10611_69

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 71125..71466

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 1.40e-29
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NT07_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 9.80e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 2.80e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGGGGCCAATTCACTGCTGTCGGGGTATCGAATCTTGTGGATCATGGCCCTCTTCGACCTGCCGGTGCTCACCAAGGCCGAGCGCAAGCGCGCCACGAAGTTCCGCCAGTTCCTGCTGGACGAGGGATTCTCGATGATGCAGTTCTCCTGCTACATCCGCTACACCGCGGGCAAGGAGCAGGCCGAGGCGATCACCAGGCGCATCGGCCGGGCCGTGCCGAATCCCGGCACGGTGGAGGTGATCTGGTTCACCGACAAGCAATACGAGGGCATCCAGAGCTTCCGCGGCCGCGCCTCCCAACCGCGCCCGTCGAAGCCGGACCAACTCACGCTGTTCTGA
PROTEIN sequence
Length: 114
MGANSLLSGYRILWIMALFDLPVLTKAERKRATKFRQFLLDEGFSMMQFSCYIRYTAGKEQAEAITRRIGRAVPNPGTVEVIWFTDKQYEGIQSFRGRASQPRPSKPDQLTLF*