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berkeley_reactor_200306_biofilm_scaffold_10611_92

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 98457..99290

Top 3 Functional Annotations

Value Algorithm Source
Trehalose/maltose transport system permease protein MalG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZS0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 1.70e-128
Trehalose/maltose transport system permease protein MalG {ECO:0000313|EMBL:EYR81147.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 2.40e-128
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 277.0
  • Bit_score: 457
  • Evalue 1.70e-126

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGAGCAAGCCGTCGACGCTGCGCCGCATCCTCACCACCGACCTGCCGGTGCTGGTCATCGTGCTGATCGCCATCGGGCCCTTCGCCTGGATGGTCCTGACCTCGCTGACCCCGTCGGAGCAGCTCGCCGCGAGCGGTGTGTCGCTGTCGCCGGCGGGCTGGGGGCTCGACAACTATGTCAGGCTGCTGCGCCGCACCGATTTCGCCGTCAACATGGGCCACAGCCTGATCGTCGCCCTCGGCACCGTCGTGCTCGGCCTCGCCGTCTCGGTGGCGGCGGCCTATGCCTTCTCGCGCTTCCGCTTCGCCGGACGCAAGGCGCTGATGCTGCAGTTCCTTCTGGTCAACATGTTCCCGGTGGTGCTGCTGATCCTGCCGCTGTTCGTGCTGATGCGCCGGCTCGGCCTGCTCGACACCCATCTCGGCCTGATCCTCGCCAACGCCACCGTCGCCATCCCCTTCGCGGTGTGGATGCTGACCAGCTATGTCGGCGCCATCCCCAAGAGCCTCGACGAGGCGGCGATGACCGACGGCTGCTCGCGCCTCGGCGCGCTCTGGCGCATCGTGCTGCCGCTGGCCCTGCCCGGCATTGTCTCGACAGGCATATACATCTTCATCACCGCCTGGAACGAGTACCTCTACGCCCTGACCCTGGGCGGCCGGACCGTGCGCACCGTCACCGTGGCGATCCAGACCCTGATCGGCGAGTACCAGATCGAATGGGGCCTGCTGGCGGCCGGCGGCGTGGTGGGCGCGCTGCCGGCGACGCTGCTCTTCCTCCTCGTGCAACGGCGCCTGATCGGCGGCCTCACCCAGGGCGCGGTCAAGGGCTGA
PROTEIN sequence
Length: 278
VSKPSTLRRILTTDLPVLVIVLIAIGPFAWMVLTSLTPSEQLAASGVSLSPAGWGLDNYVRLLRRTDFAVNMGHSLIVALGTVVLGLAVSVAAAYAFSRFRFAGRKALMLQFLLVNMFPVVLLILPLFVLMRRLGLLDTHLGLILANATVAIPFAVWMLTSYVGAIPKSLDEAAMTDGCSRLGALWRIVLPLALPGIVSTGIYIFITAWNEYLYALTLGGRTVRTVTVAIQTLIGEYQIEWGLLAAGGVVGALPATLLFLLVQRRLIGGLTQGAVKG*