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berkeley_reactor_200306_biofilm_scaffold_4811_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13217..13726

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 169.0
  • Bit_score: 243
  • Evalue 1.20e-61
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX54_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 169.0
  • Bit_score: 243
  • Evalue 8.50e-62
ruvC; Crossover junction endodeoxyribonuclease ruvC similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 169.0
  • Bit_score: 243
  • Evalue 2.40e-62

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGACGCCCGTCCGCATCCTCGGCATCGATCCGGGCCTCCGCCGCACCGGCTGGGGGGTGATCGACGTGGTCGGCAACAAGCTGATCTTCGTCGCCTGCGGCACGGTGACCTCGGACGACAAGGACGAGCTCGCCCGCCGTCTCGTCTCGCTGCACGACGGCCTCAGCGAGGTGGTGGCGCGCCACGCCCCGGACGAGGCGGCGGTGGAGGCGACCTTCGTCAACAAGGACGCGGCCGGGACGCTGAAGCTCGGCCAGGCCCGCGGCATCGCCCTGCTGGTGCCGGCCCGCGCCGGCCTGCCGGTCGGCGAATATGCGCCGAACCTGGTGAAGAAGACCGTGGTCGGCGCCGGCCATGCCGAGAAGCAGCAGATCCGCCTGATGATCAAGATCCTGCTGCCCAAGGCCGATCCGAAGTCGGACGACGCCGCCGACGCCCTGGCCATCGCCATCACCCATGCGAACCATCGCGGCCGCCGCAGCCTGGAGGCGATGCTGGCGCGGGCGTGA
PROTEIN sequence
Length: 170
MTPVRILGIDPGLRRTGWGVIDVVGNKLIFVACGTVTSDDKDELARRLVSLHDGLSEVVARHAPDEAAVEATFVNKDAAGTLKLGQARGIALLVPARAGLPVGEYAPNLVKKTVVGAGHAEKQQIRLMIKILLPKADPKSDDAADALAIAITHANHRGRRSLEAMLARA*