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berkeley_reactor_200306_biofilm_scaffold_4811_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13738..15021)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLZ3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 401.0
  • Bit_score: 231
  • Evalue 1.10e-57
MFS transporter {ECO:0000313|EMBL:KJB95262.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 384.0
  • Bit_score: 235
  • Evalue 1.10e-58
major facilitator family protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 425.0
  • Bit_score: 228
  • Evalue 3.50e-57

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGCGCCTGAGGCAGCGGCTCGGCGGCATCGGCGAGGCCTTTGCCGATCGCAATTTCCGCCTCTATTCCGTGGGGTCCATCGTCTCCTGGATCACCTATTTCGTGCAGCAGATCGCCTTTTCCTGGGCGGCCTGGGAGCTCACCCGCTCGCCGGCCTGGCTGGCGGCCATCGTGCTGCTCGATGCGCTCGCCAATGTGCTGCTGCTGCCGTTCGGCGGGGCGCTGGCCGATCGCATCGACCGTCTGAGGATGGTCGTGACCGCCTATGGCTTCGACTTCCTCAAGGCGCTCGTCCTCACGGTCCTGGCGTTCACCGGACAGCTGACGCTGCCGGTGCTGTGCGTCTGCGCGGTGCTGCACGGGGTCATCCATGCGTTCAGCGTGCCGGCATCCTATGGCATGATGCCCCGCTTCGTGGCGCGCGAGCGCCTGCCTGCGGCGATCGCGGTCAGCGCCTCCTACACGCAGTTCGCAATTTTCGCCGGCCCGGCCATCGCCGGATGGATCCTGGTGCATGGCGGCGTGGCGGCGGCCTTCGCGACCAACGTCGCCGGCTACCTCGTCTATTTCGCGACGGTGTGTTTCCTGCGGACCCCCGAGGGCTACCGCCAGTCGAGGTCCGACCGCCGCTCCTTCCTGGCGGACGTGCCGGAGGGCGCGCGCTACATCCTGCGGCACGGCGGCATCCGCGCGCTCCTGGCGATGATGCTGGCGGGGGACGCGCTCCTGGCCACCGTCTACCAGCTGATGCCGGCCTACAGCGACACGCTGCTCGGCGCCGGCATCGGCGGCGTCTCGATCCTGCTCGGAACGGGCGGCCTCGGCGCGACGCTGGCGGCGCTCTGGCTGGCGCATGGCGGCTCCGTCCGCACCACGCCGCTGCGGGTGTTCTGGGCCTTCCTCCTGTTCACGCTCGCCGTCGGCGGGCTCGCCGCCTCGCCGGCCCTCCTCATCTCCGTGCCGCTCATGCTGATCTTCGGATTCGCCGGCGAGACCGCCCGGACCGCCACCCTCGCCATCCTCCAGACCACGGTGGACGATGCCCAGCGCGGGCGGGTGATGAGCACGCGCTTCCTGCTGCAGCGGGCGGCGGGAGGGCTCGGGGCCCTGGCCGTCGGCGGCTTTGCGCAGACGGTCGGGATGCGGCTGCCGATGCTCGTCGTCGCGGCCGTGGCCCTGGCCGCCTGGGGCATCGCCTGGACCGGCCGGTCGCGGATCCTGGCCGCGTTCGATCCCGCCGACGAGGCCGTTCCGGCCGTGAGCGGCGGCAGGCGCACTCCCTGA
PROTEIN sequence
Length: 428
MRLRQRLGGIGEAFADRNFRLYSVGSIVSWITYFVQQIAFSWAAWELTRSPAWLAAIVLLDALANVLLLPFGGALADRIDRLRMVVTAYGFDFLKALVLTVLAFTGQLTLPVLCVCAVLHGVIHAFSVPASYGMMPRFVARERLPAAIAVSASYTQFAIFAGPAIAGWILVHGGVAAAFATNVAGYLVYFATVCFLRTPEGYRQSRSDRRSFLADVPEGARYILRHGGIRALLAMMLAGDALLATVYQLMPAYSDTLLGAGIGGVSILLGTGGLGATLAALWLAHGGSVRTTPLRVFWAFLLFTLAVGGLAASPALLISVPLMLIFGFAGETARTATLAILQTTVDDAQRGRVMSTRFLLQRAAGGLGALAVGGFAQTVGMRLPMLVVAAVALAAWGIAWTGRSRILAAFDPADEAVPAVSGGRRTP*