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berkeley_reactor_200306_biofilm_scaffold_15188_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1139..4315

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux transporter protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDA7_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 1047.0
  • Bit_score: 1459
  • Evalue 0.0
multidrug efflux transporter protein similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 1047.0
  • Bit_score: 1459
  • Evalue 0.0
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJK83914.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 1047.0
  • Bit_score: 1459
  • Evalue 0.0

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3177
ATGACCGGCGTCTCCACCCCCTTCATCCGCCGCCCGGTCGCGACCTCGCTGCTCGGCATCGCGGTGATGCTGGGCGGGCTGCTCGGCTATCTCCAGCTGCCGGTGGCCCCGCTGCCGCAGGTCGACTTCCCCACCATCCAGGTGACGACGCAGCTGCCCGGCGCCAATGCCGGCACCATGGCGGCGCTGGTCACCGCGCCGCTGGAGCGCCAGCTCGGCCAGATCCCGTCGCTGGCGAGCATGGTGTCGTCGAGCGCCTTCGGCATCAGCCAAGTGACGCTGCAGTTCGACCTCGGCCGCGACATCGACGGCGCGGCCCAGGACGTGCAGGCCGCCATCAACGCCGCCGGCTCGACCCTGCCGCGCACCCTGCCCTATCCGCCGACCTACGCCAAGGTGAACCCGGCCGACACGCCGATCGTGACCCTGGCGCTGCGCTCCGACAGCTATTCGATCCGCCAGCTCAGCGACATCGCCGACACCCTGCTGGCGCAGCGCCTGGCCGAGGTCAGCGGCATCGGCCATGTCGAGGTGCAGGGCGGCGTGCGCCCGGCGCTGCGCATCCAGGCCGACATCGCCCGCCTCGCCGCCTATGGCCTCGGCCTGGAGGACCTGCGCACCGCCATCGCCAATTCGAGCGTCGCCGGCCCCAAGGGCTCGCTCGACGGCACGCACCAGTCCTACACCATCGCCGCCAACGACCAGATCACCGCGATCCACGCCTACAAGGACATCATCGTCGCCCAGCGCGGCGATGCGCCGGTGCGCCTGAGGGACGTGGCCGACGTGGTCGACGGCCTGGAGAACACCCGCGTCGCCGCCACCTACCAGGGCAGGCCGGCCGTGGTGATCGACATCCTGCGCCAGCCGGGCGCCAACGTCATCGACACGGTCGGCCGGATCCTCGACACCCTGCCGCGCCTGCGCGGCGCCATCCCCGCCGGCATCTCGCTGGAGGTGGTGCACGACCGCACCGAGACCATCCGGGCCTCGATCCACGACGTCGAGGTGACGCTGGTCATCGCCATCGGCCTGGTCATCCTGGTGGTGCTCATGTTCCTGCGCACGCTGCGCGCCACGATCATCGCCGGCGTCGCCCTGCCGCTGTCGGTGATCGCGACCTTCGGCGTGATGTGGCTCGCCGGCTTCAGCCTCGACAACCTGTCCCTGATGGCGCTGACCATCGGCACCGGCTTCATCGTCGACGATGCCATCGTCATGATCGAGAACATCGTCCGCCACATCGAGGACGGCGAGGACCCGCTCGACGCCGCGCTGGCCGGCGCCCGCGAGATCGGCTTCACCGTGATCTCGCTCACCGTGTCGCTGATCGCCGTGTTCATCCCGCTCCTGTTCATGAGCGGCATCGTCGGCCGCATGTTCCGCGAGTTCGCCCTGACGCTGACCATCGCCGTGGTGGTCTCGGCCGTGATATCCCTGACGCTGACGCCGATGATGTGCGCCCGCCTGCTGCGCCGGACGCCGCATCGCGAGCGCGGGTTGATGTCCGCCTTCAATGCCGGCGTCGATTGGGTGATCGCCGGCTACCACCGCTCCCTGCTCTGGGTCGTCGACCGCACCGCGCTGATGCTCGGCCTGACCGCCCTGACGCTGGCGGCGACGCTGGCGCTCTACGTCGTCATCCCCAAGGGCTTCCTGCCGCCGCAGGACACCGGCCTGATCACCGCGGTGGTGCAGGCCGAGCCGACCGTGTCGTTCGAGGCGATGCGAACGGCGCAGGGGCGCGTCGCCGCCATCGCCGCCGAGGACCGCGACATCACCGGCGTGGTGTCGTCGATCGGCGTCAGCGCCACCAACCTGACGCCCAACACCGGCGCCCTGACGCTGGTTCTGAAGCCGCGCGCCGAGCGCAGCAGCGCCGCCGCCATCATCGCCCGCCTGCAAGGGGCCACGGCTCATATCCCGGGCGTGTCGGCGACCTTCCAGGCGACGCAGGACATCCAGATCTCGACGCGGGCCAGCCGCGCCCCGTTCCAGTACACCCTGACCGGGACGGAATCCGCCGACGTGACCGGCTGGGCGGAGCGGTTCGCCGCACGCCTGCGCCAGGAGCCGGCGCTGCGCGACGTCGCCTCGGAGGCACAGGACGGCGGGGCCGAGCTGTTCGTCAAGATCGACCGCGAGGCCGCCTCGCGCCTCGGCGTCTCGGTGCAGGCGGTCAGCGACACGCTGAACGATGCCTTCGGGCAGCGCCAGATCGCCACCATCTACGCCCAGGCCAACCAGTACCGCGTCATCCTGGAGGCGCAGCCGCGCTATCTCGCCGATTCCAACGCCCTCCAGATCCTGCACGTCCCCGGCGGCGTCGATGCGCAGACCACCCTGCCCACCACCGTCGGCGGGACGGTCCAGCAGGTCTCGAGCTCCGGGACGCAGGTGCCGCTCTCCGCCGTCGCCACGGTCTCGCGCCGCACCGCGCCCCTGGTGATTGAGCACGACGAGCAGTTCCCCGCCGTCACCGTCAGCTTCGACCTCGCGTCCGGCGCCTCGCTCAGCGACGCGGTGGAGGCGATCGACCGGGCGCAGGCCGACATCGCCATGCCGGCCTCGATCACCGGCCGCTATTCCGGCGACGCGGCCGAGTTCGCCCAGTCGCTGGCCAACGAGCCCTGGCTGATCCTGGCCGCGGTGGTCACCATCTACATCGTGCTCGGCGTGCTCTACGAGAGCGCCATCCACCCGATCACCATCCTGTCGACTTTGCCCTCGGCCGGCGTCGGCGCCCTGCTGGCGCTGATGGCGCTCGACATGGACCTGTCGGTGATCGGGCTGATCGGCATCGTGCTCCTGATGGGCATCGTCAAGAAGAACGCCATCATGATGATCGACTTCGCGCTCGAGGCGGAGCGGGGCGAGGGCCTCGGCCCGCGCGAGGCCATCGTCAAGGCCTGCCTGCTGCGCTTCCGGCCGATCATGATGACGACGCTGGCCGCCCTGTTCGGCGCGCTGCCGCTGGCGCTGCAGCACGGCACCGGATCGGAGCTGCGCATCCCGCTCGGCGTCACCATCATCGGCGGCCTGATCCTCAGCCAGCTCCTGACCCTTTACACCACGCCGGTGATCTACCTGGCGCTGGAGCGGCTGCGGGTCCGACTCGCCCCGGCGGCGCCGGAGGCCCGACCGCCCTCGGCCATCGGCCACGGAGCGGTGGAATGA
PROTEIN sequence
Length: 1059
MTGVSTPFIRRPVATSLLGIAVMLGGLLGYLQLPVAPLPQVDFPTIQVTTQLPGANAGTMAALVTAPLERQLGQIPSLASMVSSSAFGISQVTLQFDLGRDIDGAAQDVQAAINAAGSTLPRTLPYPPTYAKVNPADTPIVTLALRSDSYSIRQLSDIADTLLAQRLAEVSGIGHVEVQGGVRPALRIQADIARLAAYGLGLEDLRTAIANSSVAGPKGSLDGTHQSYTIAANDQITAIHAYKDIIVAQRGDAPVRLRDVADVVDGLENTRVAATYQGRPAVVIDILRQPGANVIDTVGRILDTLPRLRGAIPAGISLEVVHDRTETIRASIHDVEVTLVIAIGLVILVVLMFLRTLRATIIAGVALPLSVIATFGVMWLAGFSLDNLSLMALTIGTGFIVDDAIVMIENIVRHIEDGEDPLDAALAGAREIGFTVISLTVSLIAVFIPLLFMSGIVGRMFREFALTLTIAVVVSAVISLTLTPMMCARLLRRTPHRERGLMSAFNAGVDWVIAGYHRSLLWVVDRTALMLGLTALTLAATLALYVVIPKGFLPPQDTGLITAVVQAEPTVSFEAMRTAQGRVAAIAAEDRDITGVVSSIGVSATNLTPNTGALTLVLKPRAERSSAAAIIARLQGATAHIPGVSATFQATQDIQISTRASRAPFQYTLTGTESADVTGWAERFAARLRQEPALRDVASEAQDGGAELFVKIDREAASRLGVSVQAVSDTLNDAFGQRQIATIYAQANQYRVILEAQPRYLADSNALQILHVPGGVDAQTTLPTTVGGTVQQVSSSGTQVPLSAVATVSRRTAPLVIEHDEQFPAVTVSFDLASGASLSDAVEAIDRAQADIAMPASITGRYSGDAAEFAQSLANEPWLILAAVVTIYIVLGVLYESAIHPITILSTLPSAGVGALLALMALDMDLSVIGLIGIVLLMGIVKKNAIMMIDFALEAERGEGLGPREAIVKACLLRFRPIMMTTLAALFGALPLALQHGTGSELRIPLGVTIIGGLILSQLLTLYTTPVIYLALERLRVRLAPAAPEARPPSAIGHGAVE*