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berkeley_reactor_200306_biofilm_scaffold_15188

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_15188_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1142
DNA (1140bp) protein (380aa)
Secretion protein HlyD n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JDA8_AGRRK
secretion protein HlyD
Multidrug resistance protein MdtA {ECO:0000313|EMBL:GAJ92598.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
berkeley_reactor_200306_biofilm_scaffold_15188_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1139..4315
DNA (3177bp) protein (1059aa)
Multidrug efflux transporter protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDA7_AGRRK
multidrug efflux transporter protein
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJK83914.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
berkeley_reactor_200306_biofilm_scaffold_15188_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4312..7413
DNA (3102bp) protein (1034aa)
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNA6_RHITR
resistance nodulation cell division (RND) drug efflux pump, inner membrane component
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB72873.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
berkeley_reactor_200306_biofilm_scaffold_15188_4
unknown

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comp(7536..7958)
DNA (423bp) protein (141aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_15188_5
unknown

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8601..9299
DNA (699bp) protein (233aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_15188_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9345..9605
DNA (261bp) protein (87aa)
Transcriptional regulator n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ACB5_RHIET
addiction module antidote protein
Addiction module antidote protein {ECO:0000313|EMBL:AJC83270.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
berkeley_reactor_200306_biofilm_scaffold_15188_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9670..11046)
DNA (1377bp) protein (459aa)
Tartrate transporter protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JHM2_AGRRK
tartrate transporter protein
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAJ93542.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
berkeley_reactor_200306_biofilm_scaffold_15188_8
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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11307..12254
DNA (948bp) protein (316aa)
HTH-type transcriptional regulator trpI, putative n=1 Tax=Ricinus communis RepID=B9TFN5_RICCO
HTH-type transcriptional regulator trpI, putative {ECO:0000313|EMBL:EEF25329.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
LysR family transcriptional regulator
berkeley_reactor_200306_biofilm_scaffold_15188_9
unknown

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13173..13604
DNA (432bp) protein (144aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_15188_10
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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13615..15510
DNA (1896bp) protein (632aa)
Glycosyl transferase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QKV2_NOSS7
Uncharacterized protein {ECO:0000313|EMBL:KHG65063.1}; TaxID=1577051 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. 2.9.;"
glycosyl transferase family protein
Displaying 10 items

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