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berkeley_reactor_200306_biofilm_scaffold_16012_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22598..23101

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase n=1 Tax=Methylocystis rosea RepID=UPI0003828DC2 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 148.0
  • Bit_score: 163
  • Evalue 1.40e-37
Lytic transglycosylase {ECO:0000313|EMBL:EXL07563.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 166.0
  • Bit_score: 160
  • Evalue 1.70e-36
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 135.0
  • Bit_score: 159
  • Evalue 4.50e-37

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Taxonomy

Ochrobactrum anthropi → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGCTGCTTCGGCTCCTCCTTGCGGGCGCGCTTGCGACCGTGGCCAGCGCCGCCGCGATGGCGGCGGAAACCACCGCCAGGACGCCCGTGGATGCGCTGATCGTCAAGCATGCCGCCCGCTACAAGGTGCCGGAGAGCCTGATCCGCCGGGTGGTGCTGCGCGAGAGCCGCTTCAACCCTGCCGCACGTCACGGCCCCTATTGGGGCCTGATGCAGATGCGCCTCGATACCGCGCGCGGCATGGGCTATCGCGGCCCGGCGCCCGGCCTGCTCGACGCCGACATCAACCTGACCTACGGCGTCGCGTATCTCGCCAATGCCTGGCGGGTGGCGCGCGGCAATGAGAGCCGCGCCGTGGCGCTCTATTCCGGCGGCTATTATTACGAGGCCAAGCGCAAGGGCATGCTGGGCGAGCTCCTGAAGTCGGCTGTCGTCACCGACACGACGCCCACCCTGATCCCCGTCTCCGTCACCGGCAGCATCCCGAAGGCCAAGGCGCAGTAG
PROTEIN sequence
Length: 168
MLLRLLLAGALATVASAAAMAAETTARTPVDALIVKHAARYKVPESLIRRVVLRESRFNPAARHGPYWGLMQMRLDTARGMGYRGPAPGLLDADINLTYGVAYLANAWRVARGNESRAVALYSGGYYYEAKRKGMLGELLKSAVVTDTTPTLIPVSVTGSIPKAKAQ*