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berkeley_reactor_200306_biofilm_scaffold_16012_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23123..24127)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, DeoR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UDY9_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 325.0
  • Bit_score: 330
  • Evalue 1.00e-87
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 325.0
  • Bit_score: 330
  • Evalue 3.00e-88
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABR61869.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 325.0
  • Bit_score: 330
  • Evalue 1.50e-87

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCTCAACCTCAACCTGGCCCATGAGACCGACGACGCGCTGATCGTGCGGGTGGCGTGGCTCTACTATGTCGCCGGGCTGAACCAGGAGGAGACGGCGGCGCGGCTCGGCCTGCACCGTTCGCGGGTCAACCGCCTCCTGTCGGAGGGACGCGACCGCGGCCTGATCAGCATCGCCATCAACCATGATTCGGCCCGCGACATCGGCGTCGAGCATGCGATCGCCCGCGCCTTCGGGCTCGACTTCTGCCTGGCGACGCCGCCGGTCGGCTTCTCCCGCATGGCTGCGGATCCGGACCTTGTCCGGATCCAGAGCGTGGTCGCCCGGCGTGCCGTCGGCACGGCCGGCGCGAATGTCCTCAAGGGCAAGCTGGGGACGGGGCCGATCACCGTCGGGGTGAGCTGGGGCCGCTCGATCGAGCAGGTGGCGCTGCAGCTCTCGGGCGTGCGCAATCCGCAGGCCCGCTTCGTCTCGCTGATCGGCTCGCTGACGCGCAATTCCGCCTCGAACCCGTTCGAGGTGGTGCAGGCCTTCGCGGCGCGCACCGGCGGCGAGGTGCATTTCCTGCCCGTGCCGTTCATCGCGGATTCGGAGGCCGACCAGCAGGTGCTGATGTCGCAGCGCATGGTGGTGGACGCGGTGGAGATGGCGCGCGCCGCCGACCTCTACCTCATCAGCGTCGGCGAGCTGCAGGAGAGCGCGGTGCTGCGGCTGCAGGACATGATCTCGGCTGAGGAGATGCAGAGCGTGCGCGACAGCGGCGCCGTGTGCGACACGCTCGGCAAGCTCTACGACATCCACGGCCGCGAGGTGCCGCACCCCCTCAGCCGGCGCAGCCTGGCGGTTGGCACCGAGCACCTCAGGGGGCGCAACGTCGTCCTGCTCGCCGCGGGCCTGGAGAAGACCCTCGCCATCATCGCGCTGCTGCGCAGCGGCCTGGTGCGCGGCCTGATCATCGACGGCGACACGGCGCTCGCCGTGCTCGACGAGCTCGCGCGCCGGTGA
PROTEIN sequence
Length: 335
MLNLNLAHETDDALIVRVAWLYYVAGLNQEETAARLGLHRSRVNRLLSEGRDRGLISIAINHDSARDIGVEHAIARAFGLDFCLATPPVGFSRMAADPDLVRIQSVVARRAVGTAGANVLKGKLGTGPITVGVSWGRSIEQVALQLSGVRNPQARFVSLIGSLTRNSASNPFEVVQAFAARTGGEVHFLPVPFIADSEADQQVLMSQRMVVDAVEMARAADLYLISVGELQESAVLRLQDMISAEEMQSVRDSGAVCDTLGKLYDIHGREVPHPLSRRSLAVGTEHLRGRNVVLLAAGLEKTLAIIALLRSGLVRGLIIDGDTALAVLDELARR*