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berkeley_reactor_200306_biofilm_scaffold_16012_45

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 47965..48258

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000376350D similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 96.0
  • Bit_score: 126
  • Evalue 8.70e-27
SAF domain protein {ECO:0000313|EMBL:EDO62003.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 80.0
  • Bit_score: 77
  • Evalue 6.50e-12
galactarate dehydratase similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 95.0
  • Bit_score: 75
  • Evalue 6.50e-12

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 294
ATGGCGGCGGCGAACCTGATCATCCTGGCGGACGGCGACAATGTCGGCATCGCCCTCGCCGACATCGCGGCGGGCAGCCGCGCCCGCACCGTGGCCGGCCGCGGCCTGGAGGCGCTCGAAGCCATCCCGCAGGGCCACAAGATCGCCCTCGGCGACATCCCGGCCGGCGCCCTGATCATGCGCCTGGGCATGCCCGTGGCCGTCGCCACGGCGCCGATCCCGATGGGCCGGCTCGTCCACGTCCACAACGTCGCCAGCCGCTATCTCAACAATGACGAGGATCATTATGAATAG
PROTEIN sequence
Length: 98
MAAANLIILADGDNVGIALADIAAGSRARTVAGRGLEALEAIPQGHKIALGDIPAGALIMRLGMPVAVATAPIPMGRLVHVHNVASRYLNNDEDHYE*