ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16012_46

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 48251..49480

Top 3 Functional Annotations

Value Algorithm Source
Putative D-galactarate dehydratase/Altronate hydrolase {ECO:0000313|EMBL:KFC65214.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KFC65214.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 395.0
  • Bit_score: 487
  • Evalue 1.20e-134
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003739E28 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 395.0
  • Bit_score: 680
  • Evalue 8.60e-193
hydrolase similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 394.0
  • Bit_score: 476
  • Evalue 4.10e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAATAGTCCCGTCGCCGGGCCGGCCCACCCCGCTGAGCGTATGCGAGGCTTCGCGCGCGCCGACGGGCGCAAGGGCATCCGCAACTATCTCCTTGTCGCCTATCTCGTCGAATGCGCCCATCACGTCGCCCGCAAGATCGCCACGCCCTACGAGGAGGACGGGGTGCAGCTCATCGGCTTTCCCGGCTGCTATCCCAGCGACTATGCCGACCGGGTGATGACCGACCTTGCCACCCATCCCAATGTCGGCGCGGTGCTGCTGGTCTCGCTCGGCTGCGAGGAGTTCCAGCGCCGCCGGCTGCAGGCGGCGATCACCGCCTCGGGACGCCCCGTCGAGCTCATGACCATCCAGAGCTGCGGCGGCACAGCCGCCACGGTGGCCCTCGGCCGGGCCTGGGTCGAGGAGCACCTGGCAGCGCTGAAGGCGGCGCCGACCGTGCCGCTCGGCTTCGGCGACCTCGTCGTCGGCACCAAGTGCGGCGGCTCGGACGGGCTCAGCGGCGTCACCATCAACCCGGCCGTCGGCCATGCCGTGGATCTCCTCGTCGACGCCGGCGCCACTGTCATGTTCGAGGAGACCTGCGAGCTCGTCGGCTGCGAGGAGCACATGGCCGGCCGCGCCGCCTCGCCCGAGCTCGGCGAGGCCCTGCGCCGGGCGGTGCGCAAGGCCGACGCCTATTACAGCGACCTCGGCCATGGCAGCTTCGGCGGCGGCAACATCAAGTACGGCCTCTCCACCCTGGAGGAGAAGTCGCTCGGCGCCTATGCCAAGAGCGGGTCGCGGCCGATCGCCGGGCTGCTGAAGCCCGGCGTGCGTCCGCCCGCGGCCGGCCTCTACCTCATGGACACCGTCAATGACGGGCCGGTGCGCTGGGGCATCCCCAACATCAACGACACCCAGACCATCACCGAGATGGTCGCCAGCGGCTGCCATCTCATCGTCTTCACGACGGGCGCCGGCTCCGTGGTCGGCCAGGCCCTGGCCCCGGTCGTCAAGGGCGTGTCCAACAGCCGCGTGTTCGAGCGCATGCAGGGCGACATGGACGTCAACGGCGGCACCATCGCCGACGGCCTGGAGACGGTCGAGGACGTCGGCCGGCGCATCGTCGAGGCCGTGGTCGCCGCCGCCTCCGGCCTGCCGACCAAGTCCGAGGCGCTCGGCCATCAGGAGTTCGTCCTCGCCTACAAGACCTATGAACCGCTCGGGCCCGGCTGCCTGCCGGCATGA
PROTEIN sequence
Length: 410
MNSPVAGPAHPAERMRGFARADGRKGIRNYLLVAYLVECAHHVARKIATPYEEDGVQLIGFPGCYPSDYADRVMTDLATHPNVGAVLLVSLGCEEFQRRRLQAAITASGRPVELMTIQSCGGTAATVALGRAWVEEHLAALKAAPTVPLGFGDLVVGTKCGGSDGLSGVTINPAVGHAVDLLVDAGATVMFEETCELVGCEEHMAGRAASPELGEALRRAVRKADAYYSDLGHGSFGGGNIKYGLSTLEEKSLGAYAKSGSRPIAGLLKPGVRPPAAGLYLMDTVNDGPVRWGIPNINDTQTITEMVASGCHLIVFTTGAGSVVGQALAPVVKGVSNSRVFERMQGDMDVNGGTIADGLETVEDVGRRIVEAVVAAASGLPTKSEALGHQEFVLAYKTYEPLGPGCLPA*