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berkeley_reactor_200306_biofilm_scaffold_16012_64

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 62155..63078

Top 3 Functional Annotations

Value Algorithm Source
LysR family regulatory protein n=3 Tax=Burkholderia cenocepacia RepID=B4EDR1_BURCJ similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 288.0
  • Bit_score: 333
  • Evalue 1.90e-88
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC60858.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 296.0
  • Bit_score: 484
  • Evalue 9.60e-134
LysR family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 288.0
  • Bit_score: 333
  • Evalue 5.50e-89

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTTTCCGTTGAGCGGAAGCATGCGAGGCACCATGGCGGATCGTATCGGCGACATCGAGCTTTTCCGCGCGATCGTGCAGGCCGGCGGCATTTCGGCCGGCGCCGCGGCAATGGGCTCTTCGCCGCCCGCGGTCAGCCGCCGGCTTTCGGCGCTGGAAGGCCGCCTCGGCGTAAGGCTGGCCGAGCGCACCGCGCGGCGCTTCCGCCTGACCGATGAGGGCGCGCTCTATGACGAGCATTGCCGCAGCATCCTCGCCGCCCTGCGTGACGCCGAAGCCGAGGTTTCGTCCCGCGGCGCCACAGCCCGAGGTCTCCTGAAGGTCGGCGCGCCGATGGAGCTCGGCCGGCGCCGGATCGCCCCTCTGCTGGCCGAATTCGCCGGGCGGCATCCGGCGTTGGCGGTGCACCTGGTGCTTTCCGACGCCGGCCTCGAGGTCGGGCAGGACGGTCTCGACGTCGCGCTCCGGATCGACAGGCCCGACGACCCGGCGGTCATCACGCGCAAGATCGCCTCGACCCGGCGCGTCATCTGTGCCGCACCGTCCTACCTGGCGGCGCGCGGCGTGCCGGAGAGACCGGCGGATCTGGCGAGCCATGAATGCCTGCGCCTCGCGCGTCGCCACCGCCTGCACGATCGCTGGCGGTTCCGCGCCGAGGCCGGCATCGAGGAGGTCAAGGTCGGCGGTCATCTGTCGAGCGGCAGCGGCGATGCGCTCCACGGCTGGGCGCTCGAAGGGCGGGGGCTCTCGGCCGAGGCCCTGTGGGACGTGGCCGAAGACCTCGAAGCCGGACGCCTCGTCGAGTGCCTCGCCGACCACCGGTGCGACGACATCGAGCTGTTCGCCACCTTCCTGCCCGGCCAGCCCCTGCCGCCGCGCATCCGGCTCTTCGTCGATTTCATGGTGGCGGCACATCTCGGCTGA
PROTEIN sequence
Length: 308
MFPLSGSMRGTMADRIGDIELFRAIVQAGGISAGAAAMGSSPPAVSRRLSALEGRLGVRLAERTARRFRLTDEGALYDEHCRSILAALRDAEAEVSSRGATARGLLKVGAPMELGRRRIAPLLAEFAGRHPALAVHLVLSDAGLEVGQDGLDVALRIDRPDDPAVITRKIASTRRVICAAPSYLAARGVPERPADLASHECLRLARRHRLHDRWRFRAEAGIEEVKVGGHLSSGSGDALHGWALEGRGLSAEALWDVAEDLEAGRLVECLADHRCDDIELFATFLPGQPLPPRIRLFVDFMVAAHLG*