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berkeley_reactor_200306_biofilm_scaffold_16012_76

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(75455..76003)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003476D58 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 179.0
  • Bit_score: 214
  • Evalue 7.80e-53
TetR family transcriptional regulator {ECO:0000313|EMBL:EMS41007.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 212
  • Evalue 4.20e-52
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 176.0
  • Bit_score: 210
  • Evalue 3.20e-52

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Taxonomy

Methylobacterium mesophilicum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCGAAGCAGGTGGCAGGCGCTATGATCCGCAGAGACGGGGCCGGATCCTCGAGGTCGCGCTGGATGTCATCGCGGAGCATGGCGTTGCCGGCACCACCCATCGCCGCGTCGCGGCGGCCGCGAACGTCCCGCTCGGCTCGATGACCTACCACTTCACGGGAATGGACGATCTGCTCTTCGCCGCCTTCGAACGGCTGGCCGTCTCGACCGCCGAGCTCTATCGCACGCGACTGGAGGCGGCGAAGGACGTCGCGCAGGCCCGCGCGGCGGTCGTCGACCTCATCTGCGACGGGACGTGGACGTCGCCGCGCAACATGGCCCTGACCTTTGAGCTCTATGCCTATTCCATCCGCAACCCAAGGCTGCGCTCGGTGTGGCGCGGGTGGATGGCGGGCAGCCGCGCGGCGCTCGAAAGGCATTTCACGCCGGAGACGGCGCGCGTGCTCGATGCGGCGATCGAAGGCATCACGATCCACAACTCGGTGGAACCCGAGAGCATTTCGCGCGCGGATGTCGAGCGGATCGTCGATCGGTTGAGCCGGTGA
PROTEIN sequence
Length: 183
MSEAGGRRYDPQRRGRILEVALDVIAEHGVAGTTHRRVAAAANVPLGSMTYHFTGMDDLLFAAFERLAVSTAELYRTRLEAAKDVAQARAAVVDLICDGTWTSPRNMALTFELYAYSIRNPRLRSVWRGWMAGSRAALERHFTPETARVLDAAIEGITIHNSVEPESISRADVERIVDRLSR*