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berkeley_reactor_200306_biofilm_scaffold_22810_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(6389..8056)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A82 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 554.0
  • Bit_score: 938
  • Evalue 1.80e-270
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAD49797.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 554.0
  • Bit_score: 902
  • Evalue 2.70e-259
general substrate transporter similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 549.0
  • Bit_score: 879
  • Evalue 4.90e-253

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGGTATCGATTCCCACCGACCTGCCGAAACACCATGCGGCGACGCAGAGCGAGAAGCTCGTCATCGCCGCCTCCTCGCTGGGGACGGTGTTCGAATGGTACGACTTCTATCTCTACGGCCTCCTGGCCACGGTGATCACGGCGCAGTTCTTCTCCGGCGTCAACGAGACCACCGGCTTCATCTTCGCCCTGGCCGCCTTCGCCGCCGGCTTTGCCGTGCGTCCGTTCGGCGCGCTCGTCTTCGGGCGGATCGGCGACCTCGTCGGCCGCAAGAACACCGTCCTCGTCACCATGGGCATCCTGGGCCTGTCGACCTTCCTGGTCGGCCTGCTGCCGAGCTATGCCTCGGCCGGCGTCGCCGCGCCGGTGGCGCTGGTGCTGCTGCGCCTGCTGCAGGGCCTGGCGCTCGGCGGCGAATATGGCGGGGCGGCGACCTATGTCGCCGAGCATGCGCCCAACAACAAGCGCGGCCTCTACACCAGCTTCATCCAGACCACGGCGACGCTCGGCCTGTTCGCCGCGCTGCTCGTCGTCATCGGCGTGCGCATGGCCCTCGGCGAGGAAGCCTTCGCGTCCTGGGGCTGGCGCGTGCCGTTCCTCGTCTCGATCGTGCTGCTCGCGGTGTCGATGTGGATCCGCATGCAGCTCGCCGAGAGCCCGGTCTTCCGCAAGATGAAGGAGGAGGGCAAGGCCTCCAAGGCGCCGCTCACCGAGGCCTTCGGCCAGTGGAGCAACCTCAAGGTCGTCATCCTCGCCCTGGTCGGCGCCGTCGCGGGCCAGGCGGTCGTCTGGTACACGGGCCAGTTCTATGCGCTGTTCTTCCTGGAGAAGACCCTCAAGGTCGACGGCGCCACCACCAATATCCTCACCGCCATCGCCCTGGCGCTGGCCACACCGGGCTTCGTCTTCTTCGGCTGGCTCTCCGACCGGATCGGGCGCAAGCCGATCATCCTGGCCGGCTGCCTCCTGGCGGCGCTGACCTATTTCCCGCTGTTCGAGGCCCTGTCGAAGGCGGCCAATCCGGCGCTCTATGCCGCGCAGCAGACGGCGCCCGTCAGCGTCACCGCCGATCCTGCCGACTGCTCGCTGCAGTTCGACCCGATCGGCAAGAACAAGTTCGATTCCAAGTCCTGCGACATCGCCAAGTCCTACCTTGCCAAGGCCAGCGTCTCCTACTCCAACATCGCGGCTCCGGCCGGCGCCGTGGCCGAGATCGAGATCGGCGGCGTGAAGATATCAGGCGTCGATCCCGCAGCCGTCTCGGGCGATGCCCGCAAGGCCGCCATCGCCGCCTTCCAGGACAAGGCCAAGGCGGCGCTGACCGCGGCCGGCTATCCCGCCAAGGCCGATCCGGCCGCGATCAACAAGCCGGTGGTGGTGCTGATCCTGTTCGTCCTGGTGCTCTACGTCACCATGGTCTACGGGCCGATCGCCGCTCTCCTGGTGGAGCTGTTCCCGACCAGGATCCGCTACACCTCGATGTCCCTGCCCTACCATATCGGCAATGGCTGGTTCGGCGGCTTCCTGCCCACCACCGCCTTCGCCATGGTGGCCGCCACCGGCGACATCTATTACGGCCTCTGGTACCCGATCGTCGTCGCCGTCATCACCCTGGTCGTGGGCCTCCTGTTCCTGCCCGAGACCTACAAGCGCCGCATCGACGGCTGA
PROTEIN sequence
Length: 556
MVSIPTDLPKHHAATQSEKLVIAASSLGTVFEWYDFYLYGLLATVITAQFFSGVNETTGFIFALAAFAAGFAVRPFGALVFGRIGDLVGRKNTVLVTMGILGLSTFLVGLLPSYASAGVAAPVALVLLRLLQGLALGGEYGGAATYVAEHAPNNKRGLYTSFIQTTATLGLFAALLVVIGVRMALGEEAFASWGWRVPFLVSIVLLAVSMWIRMQLAESPVFRKMKEEGKASKAPLTEAFGQWSNLKVVILALVGAVAGQAVVWYTGQFYALFFLEKTLKVDGATTNILTAIALALATPGFVFFGWLSDRIGRKPIILAGCLLAALTYFPLFEALSKAANPALYAAQQTAPVSVTADPADCSLQFDPIGKNKFDSKSCDIAKSYLAKASVSYSNIAAPAGAVAEIEIGGVKISGVDPAAVSGDARKAAIAAFQDKAKAALTAAGYPAKADPAAINKPVVVLILFVLVLYVTMVYGPIAALLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGDIYYGLWYPIVVAVITLVVGLLFLPETYKRRIDG*