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berkeley_reactor_200306_biofilm_scaffold_22810_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8284..9018)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13E99_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 238.0
  • Bit_score: 335
  • Evalue 4.10e-89
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 238.0
  • Bit_score: 335
  • Evalue 1.10e-89
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE37590.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 238.0
  • Bit_score: 335
  • Evalue 5.70e-89

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAGCGACGGCAAGCCGGTCGCGGTGATCACGGGCGGGGCGCGCGGCATCGGCGGCGCCACGGCCAGCCTGCTGGCGGAACGGGGCTGGGCCGTGCATGCGCTCGACCGCAACGCCCATCCCGATCAGCGCATCGCCAACCATGCCTGCGACGTGACCTCGGAGGCGAGCCTCGCGGCCTGCGCCGCGGCGATCGGCCCGATCGATGCGCTGGTGCCCTGCGCCGGCATCAACCTCAGGCCCGACGACAACCGCGCCGAGCAGCTCTCGCTCGAAGCCTGGGACAGGACGCTGGCCGTCAACCTCACCGGCGTGATGCTGACGGTGCGGACCTTCCGCCCGCATCTCAGGCCGGACGGCGCCATCGTGCTGATGGCCAGCGTCGCAGCCTTGCGCGCCATGCCGCTCGCCGATGCCTATACCGCCTCCAAGGGCGCGCTGGTGGCGCTGACGCGCTCCTGGTCGGTGGACTACGGGCGCTTCGGCATTCGCGTCAATTGCGTGTGCCCCGGCCCGACCGACACCGCCATGATGGCCGGCCTGATCGAAGGCTTCGGCCCGGGCCAGCAGCTGCAGCTGCCGCAGCAGCGCATGGCGAGCGCCGGCGAGGTCGCCGCCCTCGTCGCCTTCCTGGTCTCGCCGGAAGCCAGCTACATCTCCGGCGCGATCATCCCCGTCGACGGCGGCGCCACGGCCCACAGCGCCGGCATGCCCTTCCCCAAGCGCCGGGCCTAG
PROTEIN sequence
Length: 245
MSDGKPVAVITGGARGIGGATASLLAERGWAVHALDRNAHPDQRIANHACDVTSEASLAACAAAIGPIDALVPCAGINLRPDDNRAEQLSLEAWDRTLAVNLTGVMLTVRTFRPHLRPDGAIVLMASVAALRAMPLADAYTASKGALVALTRSWSVDYGRFGIRVNCVCPGPTDTAMMAGLIEGFGPGQQLQLPQQRMASAGEVAALVAFLVSPEASYISGAIIPVDGGATAHSAGMPFPKRRA*