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berkeley_reactor_200306_biofilm_scaffold_22810_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(26388..27512)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00036FBF75 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 370.0
  • Bit_score: 525
  • Evalue 3.20e-146
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 363.0
  • Bit_score: 426
  • Evalue 7.60e-117
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:BAP43236.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 363.0
  • Bit_score: 426
  • Evalue 3.80e-116

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Taxonomy

Pseudomonas sp. StFLB209 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGAGAATCGCCCGAGCCGAATGCCAGCTGGTCGAGATCCCCTTCCACCTCAGCGGCTCCGGCATCGGCATCATGCCGACCGCCTGGCACACGCTCGAATTCGCCCTGGTGCGGGTCGAGGACGAGCTCGGCCATGTCGGCTGGGGCGAAGGCTTCGGCTATTCCACCATCGATGCGACCAAGGCGATCGTCGACCGCCTGATCCTGCCGACCCTGATCGGTCAGGTCGTCGACGACATCCCCGCCTGGAACCGGCGCACGCAGCGCCAGCTCCACATGTTCGGCCGCTACGGCATCACCATCTTCGCCATCTCCGCCGTCGACATGGCGCTCTGGGACCTCGCTGCCAAGCGGGCCAACGTTCCACTGAGCCGGCTAATATCCGACGGCGAGAGGCGAACGCAGATCCCCTTCTATGCCAGCCTGGTGCGCTATGCCGACCGCGACCTCGTCGTGACCGCCTGCAGGCACGTGCTCGATGCCGGCTTCGGCTCGATCAAGCTGCACGAGATCGACATCAGTCATATCGCCGCCTGCCGCGCGGCGATCGGCCCCGGGCCGGACCTCTGCGCCGATGTCAACTGCGCGTGGTCCGCCGACTTCGTCGAAGCCCACCGTGCCGAGCTGATGCGGATCGAGCTGGACTGGCTGGAGGAGCCGGTCTTCCCGCCGGAGGATTTCGAGGCGCTGGCCGGCTTGCGCGGCAAGGGCCTCAGGATCGGCGCCGGCGAAAACTGGTGCACGGCGCGGCAGTTCGACCAGGCGCTCGCCGCCGGCGCGGTCGACCTCCTGCAGCCGAGCGTCACCAAGGTCGGCGGCGTCAGCGAGTTCCTCTCCGTCATCGACCGGGCGCGGACCGCCGGCGCGACGGTGATGCCGCATTCCCCCTATTTCGGGCCCGGCTTCTTCGCCAGCCTGCAGATCGCGGCGGCCCGGCCCGATATCCCCGCGCTCGAATACAATTTCGTGCAGCCGCACGCCTGGCTCGCCGACATCGAAAGCCTGCGCCGGGGCAGCCTGATCACCGTTCCCGACCGTCCCGGCCTCGGATTCGAGCCGGACCCCGACGTCCTCAGGCGCTACGGCCGCAGGCTCGGCGAAAGACACGAGGCAGCGCGACCATGA
PROTEIN sequence
Length: 375
MRIARAECQLVEIPFHLSGSGIGIMPTAWHTLEFALVRVEDELGHVGWGEGFGYSTIDATKAIVDRLILPTLIGQVVDDIPAWNRRTQRQLHMFGRYGITIFAISAVDMALWDLAAKRANVPLSRLISDGERRTQIPFYASLVRYADRDLVVTACRHVLDAGFGSIKLHEIDISHIAACRAAIGPGPDLCADVNCAWSADFVEAHRAELMRIELDWLEEPVFPPEDFEALAGLRGKGLRIGAGENWCTARQFDQALAAGAVDLLQPSVTKVGGVSEFLSVIDRARTAGATVMPHSPYFGPGFFASLQIAAARPDIPALEYNFVQPHAWLADIESLRRGSLITVPDRPGLGFEPDPDVLRRYGRRLGERHEAARP*