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berkeley_reactor_200306_biofilm_scaffold_22810_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(28309..29670)

Top 3 Functional Annotations

Value Algorithm Source
4-aminobutyrate aminotransferase n=1 Tax=Rhizobium meliloti RepID=UPI0003789732 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 442.0
  • Bit_score: 582
  • Evalue 2.70e-163
4-aminobutyrate aminotransferase family protein {ECO:0000313|EMBL:EJK86664.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 436.0
  • Bit_score: 562
  • Evalue 3.10e-157
aminotransferase similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 436.0
  • Bit_score: 560
  • Evalue 3.10e-157

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCGGCGACGGCGTTCATGATCAACGGCTTCGATCCGGCGGCCGCGAGCCGCCTCGGCCCGGAGGAGCAGCGCCTGATCGCCCGGCGGCGAGCCCTGCTCGGCCCGTCCTACAAGCTCTTCTACGAGCATCCCGTGCAGTTCGTGCGCGCCGAAGGCGTCCGGCTCTACGATCCCCAGGGCAACGCCTATCTCGATGCCTACAACAACGTGCCGGCGGTCGGGCATTGCCATCCCAAGGTCGTCGCCGCGATCGCCGAGCAGGCAGCGCGGCTCAACACCCATACACGCTATCTCGACGAGGCGATCCTCGCCTATGCCGAGGCCTTGCTGGCGACCTATCCGCCCGAGATCGGCAACGTCATGTTCACCTGCACAGGCAGCGAGGCGACGGACCTGGCGCTGCGGGTCGCCCGTTTCCACACCGGCGGCAGCGGCATCGTCGTCACCCGCAACGCCTATCACGGCATCACCAGCGCCGCCGCGGCGATCTCCCCGTCCATGGGTCCCAACGTGCCGCTCGGCGAGCATGTCCTGACCATCGCCGCGCCCAATCCCTATCGCGAGGCCGGCGACGTGGCGCAGCGCTTCGCCGAGGACGTCCGGGCGGCGGCCGCCTGGTTCGCGCGGCACGGCATCCGCTTCGCCGGCCTCGTCGTCGACACGATCTTCTCCACCGACGGCATCCTGCCCGACCCGGCCGGCGCGCTGGCCCCCGCCCTGGCGGCCGTGCACGAGGCCGGCGGGCTGTTTATCGCCGACGAGGTGCAGCCCGGCTTCGGCCGGCTCGGCAGCGCCATGTGGGGCTTCCAGCGCCACGGCATCGTCCCGGACATCGTGGTGATGGGCAAGCCGATGGGCAACGGCATGCCGATCGCCGGCATTGCGGCGCGCCCGGAGCTCCTCGACGAGTTCGGCACGAAGGTGCGCTACTTCAACACCTTCGGGGCCAATTCCGTCTCCATCGCCGCCGCGCGCGCCGTGCTCGAGGTGATCGCCGACGAGGGGCTGATGGCCAATGCCGCGGAGGTCGGGGCCCATCTCATGGCGGGGCTGCGCGCCATCGCCCGCACGACGCCCTCGCTCGGCGACGTGCGCGGCGCCGGCCTGTTCGTCGGCGCCGAGTTCGTCGATCCCCGGACGGGCGCGCCGGACGGACGCCGCGCCCTCGCCGTGGTCAACCGGCTGCGCGAGCGGCGCATCCTGATCAGCGCCTCGGGCGCCGAGGGCAGCGTGCTGAAGATCCGCCCGCCGCTGCCCTTCTCGCAGGCCGATGCCGACGAATTCCTCGTCATCCTCGCCGAGGTCGTCGCCGGATTGGATCGCGAGAACCGACCGAAGGATGACGCGAGCCCGCGATGA
PROTEIN sequence
Length: 454
MSATAFMINGFDPAAASRLGPEEQRLIARRRALLGPSYKLFYEHPVQFVRAEGVRLYDPQGNAYLDAYNNVPAVGHCHPKVVAAIAEQAARLNTHTRYLDEAILAYAEALLATYPPEIGNVMFTCTGSEATDLALRVARFHTGGSGIVVTRNAYHGITSAAAAISPSMGPNVPLGEHVLTIAAPNPYREAGDVAQRFAEDVRAAAAWFARHGIRFAGLVVDTIFSTDGILPDPAGALAPALAAVHEAGGLFIADEVQPGFGRLGSAMWGFQRHGIVPDIVVMGKPMGNGMPIAGIAARPELLDEFGTKVRYFNTFGANSVSIAAARAVLEVIADEGLMANAAEVGAHLMAGLRAIARTTPSLGDVRGAGLFVGAEFVDPRTGAPDGRRALAVVNRLRERRILISASGAEGSVLKIRPPLPFSQADADEFLVILAEVVAGLDRENRPKDDASPR*