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berkeley_reactor_200306_biofilm_scaffold_23687_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5054..5650

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C biogenesis protein CcmA n=1 Tax=Afipia birgiae RepID=UPI0003025E22 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 198.0
  • Bit_score: 232
  • Evalue 3.00e-58
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000313|EMBL:CEJ10870.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 199.0
  • Bit_score: 233
  • Evalue 1.50e-58
heme exporter protein CcmA similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 200.0
  • Bit_score: 226
  • Evalue 6.10e-57

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 597
GTGCGCCTCCTCGCCGAGAACCTCGTCTGCGAGCGCGGCGGCCGCGGCGTGTTCGCCGGCGTGTCCTTCACGCTCGATGCCGGCCGCCTCCTCGCCGTCACCGGCCGCAACGGCGCCGGCAAGTCGAGCCTGCTGCGCGTCGTGGCCGGGCTGGTGCCGAAGGCCGGCGGCAGCCTCGCCCTCGAAGGCGCGGATTCCGAGCGCGGCCTCGGCGAGCATTGCCACTATGCCGGCCATGCCGACGCCCTGAAGGCCTCGCTCACCGCCGGCGAGAACCTCGCCTTCTGGGCCGCCTTCTACGGCGACCCCTGGCTCGATCCGGACGAGGCGCTGGAGCGCCTCGCCATCGCCCATCTCGCCGACCTGCCGGCCGCCTATCTCTCCGCCGGCCAGAAGCGCCGCCTCACCCTCGCCCGGCTCTTCGTCTCGCGCCGCCCGCTCTGGCTGCTGGACGAGCCGACCTCGGCCCTCGACACGGCGACGCAGGCCCTGCTCGCCGCCCATATGCGCGAGCACCTCGCGGCCGGCGGCCTGATCCTCGCCGCGACGCATGCCGATCTCGGCCTGCCGGCGCAGCGGCTGGAGATCGGGGGATGA
PROTEIN sequence
Length: 199
VRLLAENLVCERGGRGVFAGVSFTLDAGRLLAVTGRNGAGKSSLLRVVAGLVPKAGGSLALEGADSERGLGEHCHYAGHADALKASLTAGENLAFWAAFYGDPWLDPDEALERLAIAHLADLPAAYLSAGQKRRLTLARLFVSRRPLWLLDEPTSALDTATQALLAAHMREHLAAGGLILAATHADLGLPAQRLEIGG*