ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_23687_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5994..6662

Top 3 Functional Annotations

Value Algorithm Source
Heme exporter protein B n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J143_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 218.0
  • Bit_score: 314
  • Evalue 6.70e-83
ccmB; heme ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 218.0
  • Bit_score: 314
  • Evalue 1.90e-83
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 218.0
  • Bit_score: 314
  • Evalue 9.50e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGACTGCCCTCGGCGCCCTCTTTCTGCGCGAAATACGCCTCGCCGTGCGCGTCGGCGGCGGGGCGATGATGGGGGTCGTGTTCTTCCTCGCGGTGGTCACGGTCATCCCCTTCGGCGTCGGCCCGGACATGGCGCTGCTCGGCCGCATCGGCCCGGCGGTGCTGTGGCTCGGGGCGCTGCTCGCCACCCTGCTCGGCCTCGACCGCCTGTTCCAGGCCGACCAGGAGGACGGCTCGCTCGACCTGATCCACCTTGCCGGCCCGCCGCTCGAGCTCGTCGTGGCGGTGAAGGTGGCGGCGCACTGGGTGGCGACCGGCCTGCCGCTGGTGGTGGCGGCCCCGGTCCTCGGCATCTTCGTCAACCTGCCCTTCGCCGGCGTCGGCGCGGTGACGCTGACGCTGCTGGTCGGCACGCCGGCTCTCACCTTCCTCGGCGCCATCGGCGCGGCGCTCACCGTGGCGCTCCGGCGCGGCGGCCTGCTCCTGTCGATCCTGATCCTGCCGCTGACCATCCCCGTGCTGGTGTTCGGCGTCGCCGCCGCCAACGCCGCGATCCTCGGCGCCGGACCCTTCCTGCCACCGTTCCTGATCCTGGCGGCGCTCACCCTGTTCGCGGTGGTGGTCGGGGCGGTGGCCTCGGCCTGGGCGCTGCGCTTCGCCTTGGAATAG
PROTEIN sequence
Length: 223
MTALGALFLREIRLAVRVGGGAMMGVVFFLAVVTVIPFGVGPDMALLGRIGPAVLWLGALLATLLGLDRLFQADQEDGSLDLIHLAGPPLELVVAVKVAAHWVATGLPLVVAAPVLGIFVNLPFAGVGAVTLTLLVGTPALTFLGAIGAALTVALRRGGLLLSILILPLTIPVLVFGVAAANAAILGAGPFLPPFLILAALTLFAVVVGAVASAWALRFALE*