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berkeley_reactor_200306_biofilm_scaffold_20018_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 18907..19677

Top 3 Functional Annotations

Value Algorithm Source
Histidine transport ATP-binding protein HisP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZA7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 256.0
  • Bit_score: 369
  • Evalue 1.60e-99
Histidine transport ATP-binding protein HisP {ECO:0000313|EMBL:EYR83792.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 256.0
  • Bit_score: 369
  • Evalue 2.20e-99
hisP; amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 255.0
  • Bit_score: 358
  • Evalue 1.00e-96

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
GTGCTGAAGCTCGCCGTCGACGACATCCACAAGCGCTACGGCCCGCATGAGGTGCTGAAGGGCGTGAGCCTGTCGGCCAAGGCCGGTGACGTCGTCAGCATCCTCGGCTCGAGCGGCTCGGGCAAGAGCACCTTCCTGCGCTGCATCAACTTCCTGGAACGGCCGCATCGCGGCTCGGTCGAGGTCGGCGGCGAGCGCCTCGTCACGGTGGCCGACCGGCGCACCGGCGAGCTCCGGGCCAGGAGCCCGGCCCAGCTGCAGCGCATCCGCACCCGCCTCTCCATGGTGTTCCAGAACTTCTGCCTGTGGTCGCACATGACCGTGCTGCAGAACCTGATCGAGGCGCCGGTCCATGCCCTCGGCCTCTCCCGGGCCGAGGCGGTGGACCGCGCCCGCGCCAACCTCGCCAAGGTCGGCCTCGGCCGCGAGGTGCTGGACCGCCATCCCGGCCGGCTTTCCGGCGGGCAGCAGCAGCGCGTCGCCATCGCCCGCGCTCTCTCCATGGAGCCGGAGGTGATGCTGTTCGACGAGCCGACCTCCGCGCTCGACCCCGAGCTGGTCGGCGAGGTGCTCAAGGTGATGCAGGCGCTCGCCGAGGAGGGCCGCACCATGGTGATCGTCACCCATGAGATGGGCTTCGCCCGCCACGTCTCCAGCGAGGTGATGTTCCTGCACCAGGGCCTGGTGGAGGAGCGCGGCGCGCCGGCCGAGATCTTCGAGCGGCCGCAGAGCCCGCGCCTGCAGCAGTTCCTGGCGGGCCGCCTGCATTGA
PROTEIN sequence
Length: 257
VLKLAVDDIHKRYGPHEVLKGVSLSAKAGDVVSILGSSGSGKSTFLRCINFLERPHRGSVEVGGERLVTVADRRTGELRARSPAQLQRIRTRLSMVFQNFCLWSHMTVLQNLIEAPVHALGLSRAEAVDRARANLAKVGLGREVLDRHPGRLSGGQQQRVAIARALSMEPEVMLFDEPTSALDPELVGEVLKVMQALAEEGRTMVIVTHEMGFARHVSSEVMFLHQGLVEERGAPAEIFERPQSPRLQQFLAGRLH*