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berkeley_reactor_200306_biofilm_scaffold_20018_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20544..21233

Top 3 Functional Annotations

Value Algorithm Source
ABC-type amino acid transport system, permease component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z107_PARAH similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 223.0
  • Bit_score: 274
  • Evalue 6.10e-71
ABC-type amino acid transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 223.0
  • Bit_score: 274
  • Evalue 1.70e-71
ABC-type amino acid transport system, permease component {ECO:0000313|EMBL:AGT11106.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 223.0
  • Bit_score: 274
  • Evalue 8.60e-71

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Taxonomy

Paracoccus aminophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGTCGCCGCCTATGCCGCCACGATCCTCGGGGCCGGGTGGGTCACGCTGCAGCTAGCGGCGGGCGCGCTCGTGCTCTCGATCGCGATCGGGCTGGCGGGCGCCGCTTGCAAGCTCTCCGCCAGCGCGCCGCTGCGCCTGCTGGCGGAGCTCTACACCACCGTGGTGCGCGGCATCCCCGACCTCGTCCTGATGCTGCTCACCTTCTACAGCCTGCCGACGCTGGTGAACGATCTCCTCGCCGCGGCCGGCAGCGATGCGACGGTCGAGCTCGATCCCTTCATCGCCGGCACCGCGACGCTCGGCGTGATCTTCGGCGCCTATATGACCGAGACCTTCCGCGGCGCCCTCCTCGCCATCCCGCGCGGACAGGTGGAGGCCGCGCGCGCCTACGGCCTGCGTCCCGTGCGCATCTTCACCGGCATCCTGCTGCCGCAGATGGCGCGCCTCGCCCTGCCCGGCTTCACCAACAACTGGCTGGTGCTGCTGAAGGCCACGGCCCTCGCCTCGCTGATCGGCCTGCAGGACGTGATGCTCAGCGCCAAGGCGGCCGCCGAGGCGACCGGCCAGCCCTTCACCTTCTACCTCGTGGCCGGCGGCTTCTACCTCGCCTTCACCCTGGCCTCGGTGCTGCTGCTCACCTGGCTCGGCCGCCGCCTCGACCCCACGCGGCGAGAGGCGGCGCCATGA
PROTEIN sequence
Length: 230
MVAAYAATILGAGWVTLQLAAGALVLSIAIGLAGAACKLSASAPLRLLAELYTTVVRGIPDLVLMLLTFYSLPTLVNDLLAAAGSDATVELDPFIAGTATLGVIFGAYMTETFRGALLAIPRGQVEAARAYGLRPVRIFTGILLPQMARLALPGFTNNWLVLLKATALASLIGLQDVMLSAKAAAEATGQPFTFYLVAGGFYLAFTLASVLLLTWLGRRLDPTRREAAP*