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berkeley_reactor_200306_biofilm_scaffold_20018_78

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 68674..70218

Top 3 Functional Annotations

Value Algorithm Source
Sugar phosphate permease n=1 Tax=Rhizobium sp. AP16 RepID=J2D1M3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 495.0
  • Bit_score: 646
  • Evalue 1.30e-182
MFS transporter {ECO:0000313|EMBL:KEA07697.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 495.0
  • Bit_score: 647
  • Evalue 1.40e-182
Major facilitator superfamily drug efflux transporter similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 495.0
  • Bit_score: 638
  • Evalue 1.30e-180

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGACGGATCCGACCAATGGCCCGCGCCCGGCCGAAAAGGCGCTCGTGCTGGTCGCCGTGTGCCTGGCGGCCATGGCCATGCCCCTCACCTTCACCGGGGCGGCGGTGGCGCTGCCGGCAATCGGCCGCGCCCTCGGCGGCAACCCGGTGGCGCTGAACTGGGTGACCAACGCCTTCATGCTCGCCTTCGGCTCCAGCCTGATGGCGGCCGGCGCCCTCGCCGACACCCATGGCCGCAAGCGCGTCTTCCTCGCCGGCACCGCGGTCTTCGCCGCGGCCTCGCTGGGCCTCACCTTCGCACCCGGCATCCTCGCCTTCGACCTCCTGCGCGCCGCCCAGGGCCTGGCGGCCGCGGCGGCCCTCTCCGGCGGCATGGCCGCGCTGGCGCAGACCTTCGACGGGCCGGCACGCATCCGCGCCTTCAGCTTCATCGGCACCAGCTTCGGCGTCGGCCTCGCCTTCGGGCCGATCGCCGCCGGCCTGATGATCGACGCCTTCGGCTGGCGCAGCATCTTCCTCCTCGTCGTCCTCCTCGCCCTCGCCGCCTTCGCGATCGGTGCCCGATGCCTCGGCGAATCCCGCGATCCCGCGGCGTCGGGGCTGGACTGGCCCGGCGCCGCCAGCTTCACGCTGGCGCTCACCCTCTTCACGACAGGCGTGCTGCAGGCGCCGGAGCGCGGCTGGGGCGATGCGCTGGTCATCGGCGCGCTGGCCGGCGCCGCTCTGCTGCTCGCCGCCTTCGTCGCCGTCGAGCGGCGCGTCGCGCGCCCCATGCTGGACCTGAGCCTGTTCCGCTATCCCCGCTTCGTCGGCGTCCAGCTCCTGGCGGCGGCACCGGCCTACGCCTTCGTGGTGCTGCTGGTGCTGCTGCCGCTGCGCTTCATCGGCGTCGAGGGCATGGGCGAGGTCGCTGCCGGGCAGCTGATGATCGCCCTCTCCGCCCCGCTCCTCGTCCTGCCGCTGATCGCCGGGCTGCTGACGCGCTGGGTCTCGCCGGCGCTGATCGCGGGCGCCGGGCTCGGCCTCGCCGCCGCCGGCCTGTACTGGCTCGCCCACGTGCCCGCCAGCACGGCCGCTGCCCTTGTCCCGCCGATGCTGACGATCGGCGCCGGCATCGGCCTGCCCTGGGGCCTGATGGACGGGCTGGCGGTCAGCGTGGTGCCGAAGGAGCGCGCCGGCATGGCGACCGGCATCTTCAACACCATCCGCGTCGCCGGCGAAGGCGTGGCACTCGCCGTGGTCGGCGCGGTGCTCTCGGGCCTGACCGCGGCACGCCTGCCCGCCGGTCCGGCGACGGCCGAAGCGGCGCAGCGGCTCGTCACCGGCGACCTCGCCGGCGCGGCCGCCGTCCTGCCCGGCCTCGGCCGCGATGCCCTGACGGCGAGCTACGACGCCGCCTTCGTCGCGCTGCTCCTCATCCTGACCGCGATCACCGCGCTGACCGCGCTGGTCGTGCTCTTCGCCCTCGGCTATGGCCGAGCGGCGCCGGCCGAGCCCGGCGGTATCGGGGACGTCTCCCGCACCACCGGAATGGGCGCGAGGTGA
PROTEIN sequence
Length: 515
MTDPTNGPRPAEKALVLVAVCLAAMAMPLTFTGAAVALPAIGRALGGNPVALNWVTNAFMLAFGSSLMAAGALADTHGRKRVFLAGTAVFAAASLGLTFAPGILAFDLLRAAQGLAAAAALSGGMAALAQTFDGPARIRAFSFIGTSFGVGLAFGPIAAGLMIDAFGWRSIFLLVVLLALAAFAIGARCLGESRDPAASGLDWPGAASFTLALTLFTTGVLQAPERGWGDALVIGALAGAALLLAAFVAVERRVARPMLDLSLFRYPRFVGVQLLAAAPAYAFVVLLVLLPLRFIGVEGMGEVAAGQLMIALSAPLLVLPLIAGLLTRWVSPALIAGAGLGLAAAGLYWLAHVPASTAAALVPPMLTIGAGIGLPWGLMDGLAVSVVPKERAGMATGIFNTIRVAGEGVALAVVGAVLSGLTAARLPAGPATAEAAQRLVTGDLAGAAAVLPGLGRDALTASYDAAFVALLLILTAITALTALVVLFALGYGRAAPAEPGGIGDVSRTTGMGAR*