ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_20018_123

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(114990..115577)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZYL6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 189.0
  • Bit_score: 219
  • Evalue 2.60e-54
TetR family transcriptional regulator {ECO:0000313|EMBL:KJC42842.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 187.0
  • Bit_score: 222
  • Evalue 3.30e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 189.0
  • Bit_score: 219
  • Evalue 7.30e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCGATACGGCCCGGCCCACAAGCAGGAAGCGCACAGCCGAATCCTCTCCGCGGCGGGGCGGGGCTTCCGGCGCCTGGGCTATGGCGGCATCGGCGTCGACGGCCTGGCCAAGGAGGCCGGCGTCACCTCGGGCGCCTTCTACGGCCATTTCCCCTCCAAGGCCGAGGCCTTCCGCGCCGCCGCGGTCGCCGGCCTCGTCGAGCTGCGCGAGGGCATCAAGCACCTGCGCGCCACGCAGGGCGAGGCCTGGCTGGCGGCCTTCGCCGAGTTCTACATGAGCGTCCGCCGCACCTGCGACCTCGGCGAGAGCTGCGCCCTGCAGAGCCTCAGCCCCGAGGTGGCGCGCGCCGATCAGGAGACCAAGGCGGCGTACGAGGCGGAGATGGTGCGGGTGGCGGATGCTGTGGCGGAGGGGCTGGGCGGTGGGACGTTGGAGGCGCGGCGTGGGAGGGCGTGGGCGATCCTGGCGATGCTGTCGGGGGGCGTGACGCTGGCGCGGTCGGCGGTGGATGCGGGGCTGGCGGAGGCGATTGCTGGGGGGGTGAAGGGGGCGGTGCTGGCGTTGGCGGGGGGCACCCACGGATAG
PROTEIN sequence
Length: 196
MRYGPAHKQEAHSRILSAAGRGFRRLGYGGIGVDGLAKEAGVTSGAFYGHFPSKAEAFRAAAVAGLVELREGIKHLRATQGEAWLAAFAEFYMSVRRTCDLGESCALQSLSPEVARADQETKAAYEAEMVRVADAVAEGLGGGTLEARRGRAWAILAMLSGGVTLARSAVDAGLAEAIAGGVKGAVLALAGGTHG*