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berkeley_reactor_200306_biofilm_scaffold_20018_128

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(118639..119493)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K0P4_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 264.0
  • Bit_score: 397
  • Evalue 5.90e-108
dppC; peptide ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 264.0
  • Bit_score: 397
  • Evalue 1.70e-108
ABC transporter membrane spanning protein (Dipeptide) {ECO:0000313|EMBL:ACM38442.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 264.0
  • Bit_score: 397
  • Evalue 8.30e-108

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCGAGGCGCCCGCGATCCTCCCCGCGCGGCGGCGCCGGCGTCCCGGCTGGCCGGTGCTGCTCGGCGCGGCGCTGCTGGCCCTGGTGGTCGCCGCCGCGCTGCTGGCGCCCGTCATCGCCCCGTTCGACCCCGCGCGCATGGCCGCCGGCCCGCGCCTCGCCCCGCCCTCGGCCGCCCACTGGTTCGGCACCGACGAGTTCGGCCGCGACCTCCTCAGCCGCGTGCTGCACGGCGCCCGCCTCTCCACCGGCATCGGCCTCGTCGCCGTCGTGCTCGGCCTCACCACCGGCGGCACGGCCGGGCTGCTCGCCGCCTTCGGCGCGCGCTGGGTGCAGGCCGGGGTGCTGCGCGTCGTCGACGTGCTCTATTCCTTCCCCGACACGCTGATCGCCCTGGCGCTGGTCGCCTTCCTCGGGCCGGGCCTCGGCAATGCCACGCTCGCCATCGCCATCAGCCTGGTGCCGTTCTATGCCCGCGTCGCCTATGGCCTGGCCATCGTCGAGCGCAACAAGCCCTATATCGAGGCGGCGCGTCTCGGCGGCGTCGGCCCCGGCCGGATCCTCGCGGTGCACGTGCTGCCGAACATTGCGCAGACCCTTGTTGTCATGGGCACGCTCGGCTTCTCCTCCGCCATCCTCTCGGCCGCCGGCCTGTCCTTCCTCGGCCTCGGCGTGCAGCCGCCGGCGCCGGAATGGGGCGCGATCCTGGCCAGCGGCCGCAACTACATCGCCAAGGCGCCGTGGATCCTGGTGTTCCCGGGCCTGGCCATCTGCCTCACCGTCCTCTCCTTCAACCTGCTCGGCGACAGCATCCGCGACCTGCTCGACCCGCGCCAGCGCGGCCGGCGCTAG
PROTEIN sequence
Length: 285
MSEAPAILPARRRRRPGWPVLLGAALLALVVAAALLAPVIAPFDPARMAAGPRLAPPSAAHWFGTDEFGRDLLSRVLHGARLSTGIGLVAVVLGLTTGGTAGLLAAFGARWVQAGVLRVVDVLYSFPDTLIALALVAFLGPGLGNATLAIAISLVPFYARVAYGLAIVERNKPYIEAARLGGVGPGRILAVHVLPNIAQTLVVMGTLGFSSAILSAAGLSFLGLGVQPPAPEWGAILASGRNYIAKAPWILVFPGLAICLTVLSFNLLGDSIRDLLDPRQRGRR*