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berkeley_reactor_200306_biofilm_scaffold_34479_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11404..13275)

Top 3 Functional Annotations

Value Algorithm Source
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodovulum sp. PH10 RepID=J5PT70_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 617.0
  • Bit_score: 908
  • Evalue 2.30e-261
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 617.0
  • Bit_score: 908
  • Evalue 3.20e-261
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 619.0
  • Bit_score: 899
  • Evalue 3.00e-259

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGATGGAGCGGGACTTCGACGTCATCGTCGTCGGCGGCGGGCATGCGGGCTGCGAGGCGGCCGCAGCGGCGGCACGGCTCGGCGCACGCACGGCGCTCATCACCCATCGCTCCGCCACGATCGGGGCGATGTCCTGCAACCCCGCGATCGGCGGGCTCGGCAAGGGCCATCTCGTGCGCGAGATCGACGCGCTCGACGGATTGATGGGTCGGGTCGCCGATGCCGGCGGCATCCAGTTCCGGGTGCTGAACCGGCGCAAGGGCCCGGCGGTGCGCGGCCCGCGCGCCCAGGCCGATCGCAAGCTCTATGCCGCGGCGATGCAGGCCGCCATCCGCGAGCAGGATGGGCTGGTGGTGGTCGAGGCCGAGGCCGACGACATCGAGGTGCGCGACGGCCGCGTCGCCGCGGTTCTCGCCCGCGACGGCCGGCGCTTCGGCTGCGGCGCCGTGGTGCTCACGACAGGCACGTTCCTGCGCGGCGTCATCCATGTCGGCGAGGTGAAGACCCCGGCCGGGCGAATCGGAGAGGCGCCGGCGCTCGGCTTGTCCGCGACGCTGGAGCGGCTCGGCTTCGCCCTCGGCCGGCTCAAGACCGGCACGCCGGCCCGGCTCGACGGCACGACCATCGACTGGGCCTCCCTTGAGATGCAGCCGGGCGACGAGCCGCCCGAGCCGTTCTCGACGTTGACGGACGTGCTGCCCAACCCGCAGGTCGCCTGCGGTATGACCAGGACGACCAGGGCGACCCATGCGGTCATCCGGCAGAACATCCACCGGGCGCCGATCTATTCCGGGCAGATCGAGAGCCGCGGCCCGCGCTACTGCCCTTCCATCGAGGACAAGGTGGTGCGGTTCGGCGACCGGGAGGGCCACCAGGTCTTCCTGGAGCCGGAGGGCCTGGACGACGACACCGTCTATCCCAACGGCATCTCGACCTCGCTGCCGGCCGAGGTGCAGGCGGCGATGATCGCCACCATACCCGGGCTGGAGCGGACGCGGATCCTGCGTCCCGGCTATGCCGTGGAGTATGACCATGTCGACCCGCGCGAATTGTTCGCCACGCTTGAGACCAAGCGGCTCGTCGGCCTGTTCCTGGCCGGCCAGATCAACGGCACGACCGGCTATGAGGAGGCGGCGGGCCAGGGCCTGGTGGCCGGGCTCAACGCGGCGCGGCGGGCCGGCGGCGGGGAGGGCGTCGGCTTCGGGCGCGACACCGCCTATCTCAGCGTGATGCTGGACGATCTGGTGACGCGCGGGGTGAGCGAGCCCTACCGCATGTTCACCTCCCGGGCGGAGTATCGGTTGACCCTGCGGGCCGACAATGCCGACCGGCGCCTGACCGGGCGCGGCCTGGAGCTCGGCCTGGTCGGAGCGCGGCGGCGCGAGGCCTGGGTCGCCAAGCGCGCGGCGCTGGAGCAGGCCACGGCGCTGGCGAAGGCGGTGTCGCTGACGCCGAACGAGGCCGAAGCCGTCGGCATCCGCGTCAACCGCGACGGCGTTCGGCGTTCGGCTTTCGACCTCATGGCCTATCCCGACGTGACTGCCGCCGATGTCGTCCGCATCTGGCCGGAGGCCGCGGCCTACCCGGCGGCGGTGCTGGAGCAGGTCGAGATCGACGCCAAATACGCCGTCTACATGGAGCGGCAGCGGGCCGACATCGCCGCCTTCCGACGCGACGAGGACGTGGCGCTGCCGGCGGATTTCGATTTCCTCGGCGTGGCCGGCCTGTCGAACGAGAGCCGCGAGAAGCTGCAATCGATTCGGCCCCGTACCATCGGCCAGGCCGGCCGCATCGACGGCATCACCCCGGCGGCGATCACCCTGCTGCTGGCCACCTTGCGCAAGCGCGGTGCCCTGAAGGCGGTGGGCTGA
PROTEIN sequence
Length: 624
MMERDFDVIVVGGGHAGCEAAAAAARLGARTALITHRSATIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVADAGGIQFRVLNRRKGPAVRGPRAQADRKLYAAAMQAAIREQDGLVVVEAEADDIEVRDGRVAAVLARDGRRFGCGAVVLTTGTFLRGVIHVGEVKTPAGRIGEAPALGLSATLERLGFALGRLKTGTPARLDGTTIDWASLEMQPGDEPPEPFSTLTDVLPNPQVACGMTRTTRATHAVIRQNIHRAPIYSGQIESRGPRYCPSIEDKVVRFGDREGHQVFLEPEGLDDDTVYPNGISTSLPAEVQAAMIATIPGLERTRILRPGYAVEYDHVDPRELFATLETKRLVGLFLAGQINGTTGYEEAAGQGLVAGLNAARRAGGGEGVGFGRDTAYLSVMLDDLVTRGVSEPYRMFTSRAEYRLTLRADNADRRLTGRGLELGLVGARRREAWVAKRAALEQATALAKAVSLTPNEAEAVGIRVNRDGVRRSAFDLMAYPDVTAADVVRIWPEAAAYPAAVLEQVEIDAKYAVYMERQRADIAAFRRDEDVALPADFDFLGVAGLSNESREKLQSIRPRTIGQAGRIDGITPAAITLLLATLRKRGALKAVG*