ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_34479_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13340..14644)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 435.0
  • Bit_score: 433
  • Evalue 3.60e-118
tRNA modification GTPase MnmE n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=MNME_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 435.0
  • Bit_score: 433
  • Evalue 2.50e-118
trmE; tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 435.0
  • Bit_score: 433
  • Evalue 7.20e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGACGGCGACGATCGCGGCCCTGTCCTCCGGCGCCGGCAAGGCCGGGGTCGCGGTGGTGCGCCTGTCCGGCCCGGCGGTCGGCGCGGCGCTCCGGCAGATCGCCGGCGGCGCGCCGACGCCGCGCATGGCTGCGCTCCGACGGTTGCGTGGCGCTGCCGGCGAGGAGATCGATCGGGCGCTGGTGCTGTTCCTGCCGGGCCCCGCGAGCTTTACCGGCGAGGACGTGGCCGAGTTCCACGTGCATGGCGGCCGGGCGGTGATCGCGGCCCTGATCGACACGCTGACCGCCATCCCCGGCATTCGCCTGGCCGAGCCCGGCGAATTCACCCGCCGGGCCGTGGAGAACGGCAAGCTCGACCTCACCGCCGCCGAGGGTATCGCCGACCTCGTCGAGGCGGAGACGGCCGGCCAGCGCCGGCAGGCGTTGCGGCAGGCGGGCGGCGCGCTGGAGCGGGCGGCATCCGCCTGGCGCGCCGAGCTGACCCGGGCCCTGGCGCTGCTCGAGGCGGAGATCGACTTTCCCGATGAGGAGGACGTGCCGGCACTATTTGCCGTCGCCACGGCGACGGCGACACGGCTGGTCGGCGAGGTCGAGGCCGCCCTGGCGGGGGCGGCGCGCGGCGAGCGCTTGCGCGAGGGGGCTCGCATCGTCATCGCCGGCCCGCCCAATGCCGGCAAGTCGACCCTGCTCAATGCCCTGGCGCGGCGGGACGTGGCGATCGTTTCGGCGATTCCCGGCACGACGCGCGATACCATCGAGGTGCATCTCGACCTCGACGGCTATCCCGCCACGCTGATCGACACCGCCGGGCTGCGTCAGACCGAGGATCCGGTCGAGGCGATCGGGGTGGCGCGGGCGCTCGACCGTGCCGGCTCGGCCGATCTGGTGGTCTGGCTCTCGCCCGCCGATGCGCCCGCCGATCCGCCGGACCTCGCCGTGCCGCTGCTGCGGGTGGCGACCAAGCGCGACCGGATCGATTCGCCGCCGCAACGATGCGATCTCGCCATCTCCGCTCTGACCGGCGCAGGTCTCGAGACGCTGACCGACCGGCTCGCGCAGGCGGCACGGGCGGCGCTGGAGGGCGGGGAGGCGGCGCTGGTGACACGGGCGCGGCACCGGCGCGAACTGGAGGCGATGGCGGTCCATCTCGGCCGCGTCGCCGCCGCCGATGCGGCGACGCCGGTGGAGTTCGCAGCCGAGGACCTGCGCCTGGCGGTGCGCGCCATCGGGCGGCTGACCGGGAGCGTCGACATCGACGAAATCTACGACGTCATCTTCCGGCAGTTCTGCATCGGCAAGTGA
PROTEIN sequence
Length: 435
MTATIAALSSGAGKAGVAVVRLSGPAVGAALRQIAGGAPTPRMAALRRLRGAAGEEIDRALVLFLPGPASFTGEDVAEFHVHGGRAVIAALIDTLTAIPGIRLAEPGEFTRRAVENGKLDLTAAEGIADLVEAETAGQRRQALRQAGGALERAASAWRAELTRALALLEAEIDFPDEEDVPALFAVATATATRLVGEVEAALAGAARGERLREGARIVIAGPPNAGKSTLLNALARRDVAIVSAIPGTTRDTIEVHLDLDGYPATLIDTAGLRQTEDPVEAIGVARALDRAGSADLVVWLSPADAPADPPDLAVPLLRVATKRDRIDSPPQRCDLAISALTGAGLETLTDRLAQAARAALEGGEAALVTRARHRRELEAMAVHLGRVAAADAATPVEFAAEDLRLAVRAIGRLTGSVDIDEIYDVIFRQFCIGK*