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berkeley_reactor_200306_biofilm_scaffold_34479_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14770..16788

Top 3 Functional Annotations

Value Algorithm Source
Thymidylate kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHR3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 701.0
  • Bit_score: 759
  • Evalue 1.80e-216
Thymidylate kinase {ECO:0000313|EMBL:EJW13069.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 701.0
  • Bit_score: 759
  • Evalue 2.60e-216
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 669.0
  • Bit_score: 742
  • Evalue 8.60e-212

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2019
ATGCCCGCCCTGCCCGCGCACAATCTCCTCGACGGGGAGACCAGCCCCTACCTGCTCCAGCACAAGGACAATCCCGTGCACTGGCGCTCCTGGGGCGAGGCGGCGCTGCAGGAGGCGCGCGCCGCCGGCAAGCCGATCCTGCTGTCGATCGGCTATGCCGCCTGTCACTGGTGCCACGTCATGGCGCATGAGAGCTTCGAGAATCCCGCGATCGCCGCGGTGATGAACGAGCTTTTCGTGAACATCAAGGTCGATCGCGAGGAACGGCCGGACGTCGATCAGATCTACATGGCTGCCTTGCAGGCGCTCGACCAGCCGGGCGGCTGGCCGCTGACCATGTTCCTGACCTCCGACGGCGAGCCGGTCTGGGGCGGCACCTATTTCCCGCCCGAACCGCGCTACGGCCGGCCGGGCTTTGCCGACGTGCTGCGCTCCGTCGCCGCCGTGTTCCGCGACGATCGGGCGCGCATCGAGCAGAACCGGGCGGCGCTGATGGCGCACCTCGCCCGCCCGCCTCGGCGCGGCAACGCCGGCCTCGGCCGGGCCGAGCTCAACCAGGTCGCGCTGCGTCTGGCCGGGTTGATCGACCCCGTCCATGGCGGGCCACGCGGCGCGCCGAAATTCCCGAACGCCTCCTTCCTCGAGCTCGTCTGGCGCGGCGGCCTGCGGCTCGACAACCCGGATCTCACCGGCGCCGTGCTGCGCACGCTGGAGCGCATCTGCCTCGGCGGCATCCGCGACCATGTCGGCGGCGGCTTTGCCCGCTATGCCGTCGACGAGCGTTGGCTCGTGCCGCATTTCGAGAAGATGCTCTACGACAACGCCCAGCTCCTGGAGCTCCTCACCCTCGCCGCCGCTGCCACCGGCGATCGTCTCTACGCCGATGCGGCCGCGGAGACCGTCGGCTGGCTGCAGCGGGAGATGATGGCCGGCGACGGCCGAGCCTTCGCCGCCTCGCTCGACGCCGATTCCGAAGGCCACGAAGGGCGCTACTATGTCTGGACGCCGGCCGAGGTCGAGGCCGTGCTCGGTCCCGGGGATGCCGCCTGGGCCTGCCGGCATTTCGACATCGCTGCGGCGGGCAATTGGGAGGGCGTCTCGATCCCGAACCGGCTGGAGACCCCGCCGCTCGATACCGCCGGCGCCGACCGATGGCGGGGCCTGCGCCGGCGCCTTCTGGACCGGCGGCTCGAACGCATCCCGCCGGCGCGCGACGACAAGGTCCTCGCCGACTGGAACGGGCTGATGATCGCCGCCGTGGCTCGCGCCGGCCGCCATTTCGACCGTGAGGACTGGCTCGCCCTGGCGATGGGCGCCTACCGTTTCGTCGTCGAATCGATGACACGGGAGGGTCGCCTCGGCCATTCCTGGCGCGCCGGCCGGCTTCTGCTGCCGGGCCTCGCCTCCGACTATGCCGACATGGTGCGGGCGGCCCTGGTCCTGGCCGAGATCACCGGCGAGCAGGCTTTTCTGGCCCAGGCCGCGGCCTGGAGCGATACGCTCGAGATCTTCTACGCCGATCCGGAGTCCGGCGGCTACTTCCTCACCGCCTCCGACGCGACCGCCCTGGTGCTGCGGCCTCGGTCCGCCCTCGACGAGGCGACGCCCAACGCCAACGGGGTGATGGCCGAGAACCTGGTGCGTCTGGCAGCGCTCACCGGAGAGGAGCGCTGGCGCGAGCGCGCCGACCGCTTGCTCATCGGCCTGGCGCCGCAAGTGGAGGCCAATGTCTTCGGCCATGCCTCGCTGCTCAACGCCCTGGACCTTCGCCTCGCCGGCGCCGAGATCGTGGTGACGGGCGCCGATGCCGGGCCTCTCCACGCCGCGGCGCTGGCCGCGCCCTTCCCGATCCGCACCGTGCTGCGGGTGGGGGCGCCGGAGGACTTGCCTGCCGGCCATCCCGCCCGGGCCATGGCGGCCGATGGCCCCGCCGCCTTCGTCTGCGCCGGCATGCGCTGCTCGCTGCCGCTGCGCCGGGCTGACGAGATCGCGCCCGCCGTCCGGGCGATGCGCGCCTGA
PROTEIN sequence
Length: 673
MPALPAHNLLDGETSPYLLQHKDNPVHWRSWGEAALQEARAAGKPILLSIGYAACHWCHVMAHESFENPAIAAVMNELFVNIKVDREERPDVDQIYMAALQALDQPGGWPLTMFLTSDGEPVWGGTYFPPEPRYGRPGFADVLRSVAAVFRDDRARIEQNRAALMAHLARPPRRGNAGLGRAELNQVALRLAGLIDPVHGGPRGAPKFPNASFLELVWRGGLRLDNPDLTGAVLRTLERICLGGIRDHVGGGFARYAVDERWLVPHFEKMLYDNAQLLELLTLAAAATGDRLYADAAAETVGWLQREMMAGDGRAFAASLDADSEGHEGRYYVWTPAEVEAVLGPGDAAWACRHFDIAAAGNWEGVSIPNRLETPPLDTAGADRWRGLRRRLLDRRLERIPPARDDKVLADWNGLMIAAVARAGRHFDREDWLALAMGAYRFVVESMTREGRLGHSWRAGRLLLPGLASDYADMVRAALVLAEITGEQAFLAQAAAWSDTLEIFYADPESGGYFLTASDATALVLRPRSALDEATPNANGVMAENLVRLAALTGEERWRERADRLLIGLAPQVEANVFGHASLLNALDLRLAGAEIVVTGADAGPLHAAALAAPFPIRTVLRVGAPEDLPAGHPARAMAADGPAAFVCAGMRCSLPLRRADEIAPAVRAMRA*