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berkeley_reactor_200306_biofilm_scaffold_34479_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 23636..24337

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ACE98863.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACE98863.1};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 236.0
  • Bit_score: 303
  • Evalue 2.30e-79
DNA polymerase III, epsilon subunit n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8B4_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 236.0
  • Bit_score: 303
  • Evalue 1.60e-79
DNA polymerase III subunit epsilon similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 236.0
  • Bit_score: 303
  • Evalue 4.60e-80

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGCGAGATCATTCTCGATACCGAAACCACCGGGCTCGATCCCAACGAGGGCCATCGCCTGGTCGAGATCGGCTGCGTCGAGATGGTCGACCGGGTGCCGACCGGCGCGACCTGGCACAAATATTTCAACCCCGAACGCGACATGCCGCAGGAAGCCTTCGCGGTTCACGGCCTGTCCGAGGAGTTCCTCAAGGACAAGCCGCTGTTCGCGAGTCTCGCCGAGGAGTTCGTCGCCTTCGTCGGCGAAGCCAGGCTGGTGATCCACAATGCCGGCTTCGACATGCGCTTCCTCAACGCGGAGCTCGCGCGGGTGAAGAAGGCGCCGCTGCCGATGGATCGGGTGGTCGACACCCTCGCCATGGCCCGGCGCAAGCATCCCGGCGCCCGCGTCTCCCTGGACGAGCTCTGCCAGCGCTACGGCATCGACAATTCCGAGCGCGTGAAGCACGGCGCCCTTCTCGACGCCGAGATCCTGGCCGAGGTCTATATCGAGCTCACCGGCGGGCGCCAGACCGCGCTCGGCCTCACCGCCGCCGTCATCGGCGCGGCCGAGACCGCCCTCGCCGCCAATCTGCTGCGTGCCCGGCCGGCGCCGCTGGCGTCGCGCCTCACGGCCGGGGAGATCGCGGCCCACGAGGCCTTCATCGCCGGCCTCGGCGGCGAGGTGATCTGGAAGCGCTACCTGCCGGAGGCCTCCTGA
PROTEIN sequence
Length: 234
MREIILDTETTGLDPNEGHRLVEIGCVEMVDRVPTGATWHKYFNPERDMPQEAFAVHGLSEEFLKDKPLFASLAEEFVAFVGEARLVIHNAGFDMRFLNAELARVKKAPLPMDRVVDTLAMARRKHPGARVSLDELCQRYGIDNSERVKHGALLDAEILAEVYIELTGGRQTALGLTAAVIGAAETALAANLLRARPAPLASRLTAGEIAAHEAFIAGLGGEVIWKRYLPEAS*