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berkeley_reactor_200306_biofilm_scaffold_34479_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24366..24860)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export protein SecB n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLJ5_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 160.0
  • Bit_score: 190
  • Evalue 1.10e-45
secB; preprotein translocase subunit SecB similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 156.0
  • Bit_score: 186
  • Evalue 3.40e-45
Protein-export protein SecB {ECO:0000255|HAMAP-Rule:MF_00821}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 156.0
  • Bit_score: 186
  • Evalue 1.70e-44

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Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCGACCGGACCCCAGCCCACGAATGGCAACGGCGACACCCGCAAGGAGGTGCAGCAGTCCATCAACGTGCTGGCGCAGTACATCAAGGACCTCTCCTTCGAGAATCCCAACGCGCCGCGCTCGCTCGGCACCCAGCAGGGCTCGCCGCAGATCACGCTGACCGTCAACGTCAACGGCCGGCCGCTGAGCCCGACCGATTTCGAGGTCGAGCTGTCGATCGAGGGCGGGGCGGGCGAGGGCGCCGGCACGCTGTTCAAGTTCGAGCTGGTCTACGGCTCGGTGGTCCGCCTCGCCGGCATCTCGCCGGATGATGCCCATGCCGTGATCATGATCGAGGGCCCGCGGCTGATGTTCCCCTTCGCCCGCCAGATCATCGCGGACGCCACCCGCAACGGCGGCTTCCCGCCGCTGATGATCGACCCGATCGACTTCGTCGCGCTCTACCGCAACCGCATGGCCCAGCTCCAGCAGCAGCCCAGCGGCCAGGCCTGA
PROTEIN sequence
Length: 165
MATGPQPTNGNGDTRKEVQQSINVLAQYIKDLSFENPNAPRSLGTQQGSPQITLTVNVNGRPLSPTDFEVELSIEGGAGEGAGTLFKFELVYGSVVRLAGISPDDAHAVIMIEGPRLMFPFARQIIADATRNGGFPPLMIDPIDFVALYRNRMAQLQQQPSGQA*