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berkeley_reactor_200306_biofilm_scaffold_34479_78

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 94422..95468

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003829DFC similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 317.0
  • Bit_score: 412
  • Evalue 2.20e-112
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 316.0
  • Bit_score: 399
  • Evalue 7.10e-109
Inner-membrane translocator {ECO:0000313|EMBL:ACS60771.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 316.0
  • Bit_score: 399
  • Evalue 3.50e-108

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAAGCAGGCCATGATCGAGCGGTTCGGGACCTGGGAGGGCTTCCTGGGCCTCGTGGCGATAGGCTTCGTCGCCTATTCCGTCGCCGTCGTTCCGGAATTTGCGACGGATTTCAACATCTCGCAGGCCATCGCCGGCATGTCGGAGCGCGGGCTGATCGTGCTGCCGATGGTGCTGCTGATCATTGCGCGGGAAATCGACCTGTCGGTGGCGAGCACGCTGGCGCTGGCCAGCGTCGTGTTCGGGGTCGCCGTCCAGGCCGGGCTGCCGATCGGCGCCGCCGTGGCGGCGGCGGTGGCGACGGGCGCGGTGGCGGGCGCCTTCAACGGCGTGCTCGTCACGGTGCTGGGGCTGCCCTCCCTTGTCGTCACGCTCGGCACGATGGCGATGTTCCGGGGCATCGGCTACGTCATCCTCGGGCCGCGCTCGGTCAACGTCTTTCCCGACAGCTTCACCGATTTCGGCATCGACAATGTCGGCAGCGCGCCGATCCCGTGGACCTTCGTTCCCTTCCTGGTGCTCCTGCCCCTGTTCGTGATCGTCCTGGGCCATACCGCGCTGGGGCGGCGCATCTATGTCATCGGCGGCAATCCGGAGGCGGCGCGCTATTCCGGCGTCAGGGTCGACAGGATCCGCTTCGGCCTCTTCGTGGTCAGCGGCATCGTCGCGGCGATCGCCGGCATCGTCTATGCCGCGCGCCTCGCCAATTCCCGGGCCGACAACGCCCTGGGCATGGAGCTCGACATCATCATCATCGCCTTGCTCGGCGGCGTGAGCGTCTTCGGCGGCCGCGGCAAGCTGATCGGCGTCTTCTTCGCGATGATCATCATCGCCGTCCTCAGAAACGTGCTGGGCCTCTACCAGATCAGCGGCGACGCCCAAGGGACCAGCACGGGTCTTCTCCTCATTGCTGCGCTTCTCCTCAACAGCACGGTGCAACGCATCTACGCGAAGTACCGCATTGTTCCGAAGCGCATCCAATCCGCCGGTCCGCGTTCGGGCGGCCAGGCGGTCACAAGCAACGAAGCGCCGAACACCCGGATGTAA
PROTEIN sequence
Length: 349
MKQAMIERFGTWEGFLGLVAIGFVAYSVAVVPEFATDFNISQAIAGMSERGLIVLPMVLLIIAREIDLSVASTLALASVVFGVAVQAGLPIGAAVAAAVATGAVAGAFNGVLVTVLGLPSLVVTLGTMAMFRGIGYVILGPRSVNVFPDSFTDFGIDNVGSAPIPWTFVPFLVLLPLFVIVLGHTALGRRIYVIGGNPEAARYSGVRVDRIRFGLFVVSGIVAAIAGIVYAARLANSRADNALGMELDIIIIALLGGVSVFGGRGKLIGVFFAMIIIAVLRNVLGLYQISGDAQGTSTGLLLIAALLLNSTVQRIYAKYRIVPKRIQSAGPRSGGQAVTSNEAPNTRM*