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berkeley_reactor_200306_biofilm_scaffold_34479_89

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 107889..108554

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C923C similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 188.0
  • Bit_score: 131
  • Evalue 1.10e-27
Uncharacterized protein {ECO:0000313|EMBL:KIJ74916.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 185.0
  • Bit_score: 125
  • Evalue 6.20e-26
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 213.0
  • Bit_score: 122
  • Evalue 1.10e-25

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Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCTGCCGCGGTACAGGCGGCGAGGCCCGTGGGGCGGCCTCGTTGCATGGAAACGCACCGAGCCATCCTGACAGCTGCCGCCGACCTCCTGGAGACGGTGCCGTATCGCGATATCGCCATGGAGCGCATCGCGGCTTCGGCCGGGGTCGGCAAGCAGACGATCTACCGCTGGTACGACAGCAAGGCGGATCTGATGCTCGACGCCTACATCGCCCGCTACACCGAGACCTTCCCACCGATCGTGCTGGGCAGCGACGCCGTCGCCGACCTCAGGACCTACATGCATCAGCTCGTCGACATCCTGCCGACCCGCACGGTGCAGGGGGCCTATCGTGCCCTGTTCGCCGAGGCGCAGCACGATCCGAGCTTCCGCCGGCGCTTCGACGAGGTGGTGCTGAAGAAGCGCCGCGACGTGGCGCGGGGCTTCATCGCCGCTGCGATGCGCAAGAAGCAGATCCGGGCCGACATCGATCCCGACGTGGTGGTCGAGATGCTGTTCTCGCCGATCCTGCAGCGCTTCATTGCCCGGCCCGAGACGCCCGACCACGCCTTTGCCGACATGGTGTTCGACACGCTGCTGGCCGGCGTCGGCGGCCCGGCCCCGGCGGATGCCGGCCCCCGTCAGAAGTCCGACGCCAGGCCCTTGATCTCCCAGTCGCCGTAG
PROTEIN sequence
Length: 222
MSAAVQAARPVGRPRCMETHRAILTAAADLLETVPYRDIAMERIAASAGVGKQTIYRWYDSKADLMLDAYIARYTETFPPIVLGSDAVADLRTYMHQLVDILPTRTVQGAYRALFAEAQHDPSFRRRFDEVVLKKRRDVARGFIAAAMRKKQIRADIDPDVVVEMLFSPILQRFIARPETPDHAFADMVFDTLLAGVGGPAPADAGPRQKSDARPLISQSP*