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berkeley_reactor_200306_biofilm_scaffold_34479_121

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 136031..137926

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003812F97 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 618.0
  • Bit_score: 745
  • Evalue 2.60e-212
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EIM25820.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 605.0
  • Bit_score: 736
  • Evalue 1.70e-209
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 616.0
  • Bit_score: 726
  • Evalue 6.00e-207

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1896
ATGCGCGTGGACAGGCCTGAGACTTCGAAGAGCGGTGGTTGGGCGCGGCTGCGTGGCTGGGCCGCCCTGGCCCTCGCCGGCATGGCGCTCATGGCCGCGACCGCGGCGCCGGCCCAGCAGCAGGAGTGGCGCTATGCCGTGTCCCTGCTCGGAGACCTCAAATATCCCGAAAGCTTCCAGCATTTCGCCTACGTCAATCCCGATGCTCCCAAGGGCGGCGCGTTGCGGCTGTCGGCCTACGGCTCCTTCGACAGCCTCAACATCGTGCCGGTGCGCGGCCAGGCGGCGGGCAGCATCGCCCTGATCTATCAGACCCTGATGACCGGCTCCCTGGACGAGCCGTTCTCGCAATATGGCGAGATCGCCGACGGCGTGAAGTTCCCCGAGGACCGCTCCTCCGTCACCTACCGCCTCAATCCCAAGGCGCGCTGGGACGACGGCCAGCCGATCACGCCGGACGATGTGGTCTGGTCCTTCTCGGTCCAGAAGGAGAACAATCCGCAATACGGCTATTACTACAGGGACGTGGCCAAGGCGCAGGCCACCGGCGAGCACGAGGTCACCTTCACCTTCGACAAGGCCGGCAACCGCGAGTTGCCGCTGATCGTCGGCCAGCTGACGGTGCTGCCCAAGCACTGGTGGACCGCGACGGGGCCGGACGGCAAGCCGCGTGACGTCACCAAGCCGACGCTGGAAAAGCCGCTCGGCTCCGGCGCCTACCGCGTCAAGAGCTTCGAGGCCGGCCGCTCCGTCACCTATGAGCGGGTCAAGGACTGGTGGGCGGCGGACCTGCCGACCGAGAAGGGCCAGAACAATTTCGACGAGATCCGCTACGACTATTTCCTCGACCCGATGGTGATCCGCCAGGCCTTCAAGGCCGGCACGGTCGATTTCCAGCTGGAGAACATCGCCCGGGAATGGATGACCGGCTACGACATCCCGGCGGTCAAGGACGGGCGCATCGTCAAGCAGGAATTCCCGGACCACAGCTCCGGCCGGATGCAGGCCTACATGTTCAACCTGCGTCGCGACAAGTTCAAGGACGAGCGCGTGCGCCGCGCCTTCAACCTCGCCTTCGACTTCGAGGAGATGAACCGCACGCTGTTCTTCGGTCTCTACACCCGGATCGACTCTTATTTCGCCGGGCTCGACCTCGCCTCCAGCGGCCTGCCTGAGGGCAAGGAGCTGGAGATCCTCGAGGCGGTGAAGGACAAGGTGCCGCCTTCGGTGTTCACCACGCCCTACCAGAACCCGGTCAACGGCACGGAGGAGGCACGCCGCGCCAATCTGCGCGACGCTCTCCGGCTCCTGAAGGAAGCTGGTTGGGAGGTCAAGGACCGCAAGCTCACCAATGTCGCCACCGGCGAGGTGATGACGGCCGAATTCATGTTGGATGATGCCAGCTACGAAAGGCTGGCGCTCGCCTACAAACCGGCGCTGGAGCGTCTCGGCATTGTCGTGACCATCCGCACCATCGATTCCGCGCAGTATAAGGCGCGAGTCGACAACCGCGACTTCGACATCATCATGCTGAGCATTGCTCAATCGCAGTCGCCGGGCAATGAACAGCGGCAATATTGGGGCTCGGCGGCAGCGGACCGCGTAGGGTCTGACAATGTGATGGGCATCAAGGATCCGGGGGTGGACGCGCTGATCGACCGTGTTATCTTCTCCTCCTCCCGCGAGGATCTGGTCGCCGCCACCAAGGCACTCGACCGCGTGCTGCTCGCCCACAACTACGTGGTGCCGCAATACCGCTCGCCGACCTGGCGCACGCTGCGATGGGATCGCTTCTCCGGCCCGGCGGTTCTGCCGGACAGGCCGACGGACGGCGGGCTGCTCTCCGTGTGGTGGTACGACGCCGCCAAGGCCGCCAAGAGCGGGGCGGCGAAATGA
PROTEIN sequence
Length: 632
MRVDRPETSKSGGWARLRGWAALALAGMALMAATAAPAQQQEWRYAVSLLGDLKYPESFQHFAYVNPDAPKGGALRLSAYGSFDSLNIVPVRGQAAGSIALIYQTLMTGSLDEPFSQYGEIADGVKFPEDRSSVTYRLNPKARWDDGQPITPDDVVWSFSVQKENNPQYGYYYRDVAKAQATGEHEVTFTFDKAGNRELPLIVGQLTVLPKHWWTATGPDGKPRDVTKPTLEKPLGSGAYRVKSFEAGRSVTYERVKDWWAADLPTEKGQNNFDEIRYDYFLDPMVIRQAFKAGTVDFQLENIAREWMTGYDIPAVKDGRIVKQEFPDHSSGRMQAYMFNLRRDKFKDERVRRAFNLAFDFEEMNRTLFFGLYTRIDSYFAGLDLASSGLPEGKELEILEAVKDKVPPSVFTTPYQNPVNGTEEARRANLRDALRLLKEAGWEVKDRKLTNVATGEVMTAEFMLDDASYERLALAYKPALERLGIVVTIRTIDSAQYKARVDNRDFDIIMLSIAQSQSPGNEQRQYWGSAAADRVGSDNVMGIKDPGVDALIDRVIFSSSREDLVAATKALDRVLLAHNYVVPQYRSPTWRTLRWDRFSGPAVLPDRPTDGGLLSVWWYDAAKAAKSGAAK*