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berkeley_reactor_200306_biofilm_scaffold_34479_128

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(144549..145184)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377E162 similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 174.0
  • Bit_score: 198
  • Evalue 5.10e-48
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 193
  • Evalue 4.70e-47
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 193
  • Evalue 2.30e-46

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCCGGGCACGCCCGAAACGGGCGAGCCCGCTGCCGCGGCACCGCGGCCAGACCTGGTGCTGCTCGGCGTGTTCGGCGCGGCGCATGGCGTGCGGGGCGAGGTGCGGCTGAAGTCCCATACGGGCGATCCCGCCGCCATCGCCGGCTATGGCCCGCTGCGGACCGAGGCCGGACGGGTGTTCGAGCTCGTCTCGGTGCGCCCGCTCAAGGACGACATGCTGGTCGCCCGGGTGAAGGGCATCTCGGACCGCACCGCGGCCGAGGCGCTGACCAACCTGCGCCTGCATGTCGAGCGCGCCGTTCTCGGCGAGGCCGACGCGGAGGAGGACGAGTTCTTCCACGCCGACCTGATCGGCCTCACGGCCGAGACCGCCGACGGCAACGCCTTCGGCACCGTCCTGGCCCTGTTCGACTTCGGGGCCGGCGATCTCCTGGAGATCAAGCCGTCCGACGGCGGACGCAGCCTGTTCCTGCCCTTCACCAAGGCCGCCGTGCCGGTAGTGGACGTGCGGGGCGGGCGCCTCGTCGTCGTGCCGCCGGCGGAGATCGAAGGCGAGCCGCCGCCGGCCGCGGGACAGGTCGATATCGAGCCTGCGGCGCCGCGGCGCCGCGGCCTCGGGCCGCCGGCCCGATGA
PROTEIN sequence
Length: 212
MPGTPETGEPAAAAPRPDLVLLGVFGAAHGVRGEVRLKSHTGDPAAIAGYGPLRTEAGRVFELVSVRPLKDDMLVARVKGISDRTAAEALTNLRLHVERAVLGEADAEEDEFFHADLIGLTAETADGNAFGTVLALFDFGAGDLLEIKPSDGGRSLFLPFTKAAVPVVDVRGGRLVVVPPAEIEGEPPPAAGQVDIEPAAPRRRGLGPPAR*