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berkeley_reactor_200306_biofilm_scaffold_34479_130

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(145632..147191)

Top 3 Functional Annotations

Value Algorithm Source
Ffh, signal recognition particle protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA271C similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 528.0
  • Bit_score: 750
  • Evalue 1.10e-213
signal recognition particle protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 534.0
  • Bit_score: 733
  • Evalue 2.40e-209
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 534.0
  • Bit_score: 733
  • Evalue 1.20e-208

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Taxonomy

Methylobacterium radiotolerans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGTTCGATGGCCTTTCCTCACGTCTGTCCGACGTGCTCGACAAGCTGACCCGGCGCGGCGCCCTCTCCGAGGGCGACGTGGCCGAGGCCATGCGCGAGATCCGGCGCGCGCTGATCGAGGCCGACGTGGCGCTCGACGTGGTGCGCAGCTTCACCGACAAGGTGCGCAACCGCGCCGTCGGCGCCGACGTGCTGAAGTCGGTCACGCCAGGGCAGATGGTCGTCAAGATCGTCAACGACGTGCTGATCGAGACGCTGGGCTCGGACGCCCAGACCATCGACCTCGAAGCCGTGCCGCCGGTGCCGATCCTGATGGTCGGCCTGCAGGGCTCGGGCAAGACCACCACCACCGCCAAGATCGCCAAGCGCCTCACCGACCGCAACAAGAAGAAGGTGCTGCTGGCCTCGCTCGACACCCGCCGCCCGGCGGCGATGGAGCAGCTCGCCATTCTGGGCCGCCAGGTCGGCGTCGAGGTGCTGCCGATCGTCGCCGGCCAGAGCGCCGTGCAGATCGCCCGCCGCGCCATGGATGCCGGCCGCTTCGGCGGCTTCGACGTGGTCATGCTCGACACGGCCGGCCGCACCACGGTCGACGAGGCGCTGATGGCCGAGGCCGCCGAGGTCAAGGCCGCGACCAACCCGCACGAGGTGCTGCTGGTCGCCGACGCCCTCACCGGCCAGGACGCGGTCAACACCGCCCGCGCCTTCGACAACCGGCTCGGCATCACCGGCATCGTGCTCACCCGCCTCGACGGCGATGGGCGCGGCGGCGCGGCGCTGTCGATGCGGGCGGTCACCGGCAAGCCGATCAAGCTGGTCGGCGTCGGCGAGAAGGTCGACCAGCTGGAGGATTTCCATCCCCAGCGCATCGCCAACCGCATCCTCGGCATGGGCGACATCGTCTCGCTGGTCGAGAAGGCGGCCGAGAGCATCGACGCGGAGAAGGCCGCCAAGATGGCGGCCAGGATGCAGAAGGGCGCCTTCGACCTCGACGACCTGCGCGAGCAATTGCTGCAGATGGAGAAGATCGGCGGCATGTCCGGCGTGCTCGGCATGCTGCCGGGCATGGGCAAGATCAAGGACCAGATCGCCGGCGCCAACCTCGACGACAAGGTGTTCAAGCGCCAGCGGGCGATCATCGAATCGATGACGCCGAAGGAGCGGCGCAACCCCGACATCCTCAAGGCGAGCCGCAAGCGCCGCATCGCCGCGGGATCGGGGACCTCGCCCGAGCAGATCAACCGCCTCCTGAAGATGCACCGCCAGATGGCCGACATGATGAAGTCCATGGGCGGGGCGAAGAAGGGCGCGCTCGGCAAGATGGCCTCGATGTTCGGGATGGGCGGCGGCATGCCGCAGATCCCGCCCGGCGCGCTGGAACAGCTCGGCAAGGGCGGCGCGCCCGGCCTGCCCGGCGGCCTGCCGGGAGGCGGCCTGCCGCCGAAGATCCCGGGCCTCGGCGGGCCTGGCCTGCCGGCGAAATTCCCGGGAGGCCCCGGCCTGCCCGGCCTCGGCGGCCTGCCGCCGGGCTTCCCCTTCGGCGGGGGCAAGAAGAAGTGA
PROTEIN sequence
Length: 520
MFDGLSSRLSDVLDKLTRRGALSEGDVAEAMREIRRALIEADVALDVVRSFTDKVRNRAVGADVLKSVTPGQMVVKIVNDVLIETLGSDAQTIDLEAVPPVPILMVGLQGSGKTTTTAKIAKRLTDRNKKKVLLASLDTRRPAAMEQLAILGRQVGVEVLPIVAGQSAVQIARRAMDAGRFGGFDVVMLDTAGRTTVDEALMAEAAEVKAATNPHEVLLVADALTGQDAVNTARAFDNRLGITGIVLTRLDGDGRGGAALSMRAVTGKPIKLVGVGEKVDQLEDFHPQRIANRILGMGDIVSLVEKAAESIDAEKAAKMAARMQKGAFDLDDLREQLLQMEKIGGMSGVLGMLPGMGKIKDQIAGANLDDKVFKRQRAIIESMTPKERRNPDILKASRKRRIAAGSGTSPEQINRLLKMHRQMADMMKSMGGAKKGALGKMASMFGMGGGMPQIPPGALEQLGKGGAPGLPGGLPGGGLPPKIPGLGGPGLPAKFPGGPGLPGLGGLPPGFPFGGGKKK*