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berkeley_reactor_200306_biofilm_scaffold_34479_138

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 155165..156679

Top 3 Functional Annotations

Value Algorithm Source
long-chain-fatty-acid--CoA ligase (EC:6.2.1.26) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 505.0
  • Bit_score: 660
  • Evalue 3.20e-187
Putative Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) (Putative fadD) {ECO:0000313|EMBL:CAX23989.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CAX23989.1};; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 505.0
  • Bit_score: 660
  • Evalue 1.60e-186
Putative Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) (Putative fadD) n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CL44_METED similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 505.0
  • Bit_score: 660
  • Evalue 1.10e-186

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
ATGCTGATGCACCAGCTCATCCGCGACGGCGCCGCGCGCCGTCCCGACCGCGTCTGCTTTCGCTGGGTGGACCGCGACCGCGCCCTGACCTTCGTCCAGGCGGCCGAGGCGATCGAGGCCGCCGCCGGCATGCTGCACCATCTCGGCATCGGCAAGGGCGACCGCGTCACCATCTTCGCCCATAACGGCATGGACTATCTCGTCTCGATGTTCGCCTGCTGGCGGATCGGCGCCATCTCGGCGCTGGTCAACGTCAAGTTCGCCGACGAGCTCGACTATTACTTCGCCGACCACACGCCCTCGGTGGTGATCTACACCCACGACATGGGCGAGGCAGTGCGCCGCGCCGCGGCAAAGCTCACCCCCCTCCCGCGCCTCGTCTGCATGGACGGCCCACAGGACGGCGCCGAGAGCCTGCCGGAGCTGATGGCGGCCGGCTTCGCGCCGCCGCCCGATCCCGCGGACGAGACGGCGATCGCCCATCTCTCCTACACCTCCGGCACCACCGGCCGGCCCAAGGGCGCCTGCCTCGCCCACGAGCCGACCATGCGGGCCACCAGCTGCATCGCCGAGCGCCTGCGGATCACGGCCGAGGACGTCTCCTTCGGGCCGACGGCCCTGTCGAGCTCCTACCAGCTCGTCGGCAACCTGCTGGCGCCGCTGCGCCGGGGCGCCACGGTGAACGTGATGGGGCGTTGGACGGCAGAGAGCGGCTTCGAGGCGCTGGAGCGGACGCAGGCCACCCTGCTCGTCGCCAATCCCACCCTTCTCACCGACGTGCTGGAGGCCGCCCGCGCCCGCGGCGGGCCGCCGAAGACGCTGCGCCTCGGCATGTCCGGCGGCGGTCCCGTGCCGCCGGTGCTGAAGCGGGCCTGGCGCGACGAGCTCGGGCTGCCGCTGGTCGAAAGCTACGGCCAGAGCGAGCTCGGCGGCTTCGTCGCGCTGGGCGAGCCCGTCCTGCTGCCGGACGAGGCGCTCGGGGCCGTCGGACGCCCGCTGCCGGACAAGGATGTCCGCATCCAGGACGCCGAGGGCCGCGAGGTGCCGCCGGGCGAGCTCGGCGAGATCTGCCTCGCCGGCGGCTTCATGGTCGGCTATTGGGGCCGGCCGGAAAAGACGGCCGAGACGCTGCGCGGCGGCTTCCTCCACACCGGCGATGCCGGCACCATGGCCGCCGACGGCACCGTGACGATGCGAGGGCGCTTCGCCGAGCTCATCACCGTCGCCGGCCGCACCTGGTTCCCGCGCGATATCGAGGAGGCGCTCGCCGCCGAGGGCGGCGTGCGCGAGGCGGCGGTGGTCGGCCTGCCGGACGCGGCGCTCGGCGAGCGGCCGGTCGCTTTCGTCACCGGCGAGGCCGGCCTCGATCCGGCGGGGCTGAAGGCCGCCATCGCCCCGCGCCTCGGCTACGACCTCACGCCGCTCGCCATCCGCCGCATCGAGGCCTTCCCGATGACGCCGACCGGCAAGATCGCCAAGGCCGAGCTGCGCGCTGCCGCGCTGGCAGGCGCCTGA
PROTEIN sequence
Length: 505
MLMHQLIRDGAARRPDRVCFRWVDRDRALTFVQAAEAIEAAAGMLHHLGIGKGDRVTIFAHNGMDYLVSMFACWRIGAISALVNVKFADELDYYFADHTPSVVIYTHDMGEAVRRAAAKLTPLPRLVCMDGPQDGAESLPELMAAGFAPPPDPADETAIAHLSYTSGTTGRPKGACLAHEPTMRATSCIAERLRITAEDVSFGPTALSSSYQLVGNLLAPLRRGATVNVMGRWTAESGFEALERTQATLLVANPTLLTDVLEAARARGGPPKTLRLGMSGGGPVPPVLKRAWRDELGLPLVESYGQSELGGFVALGEPVLLPDEALGAVGRPLPDKDVRIQDAEGREVPPGELGEICLAGGFMVGYWGRPEKTAETLRGGFLHTGDAGTMAADGTVTMRGRFAELITVAGRTWFPRDIEEALAAEGGVREAAVVGLPDAALGERPVAFVTGEAGLDPAGLKAAIAPRLGYDLTPLAIRRIEAFPMTPTGKIAKAELRAAALAGA*