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berkeley_reactor_200306_biofilm_scaffold_37757_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3252..4250)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with sigma factor-related N-terminal domain containing protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 315.0
  • Bit_score: 349
  • Evalue 3.70e-93
Transcriptional regulator with sigma factor-related N-terminal domain containing protein {ECO:0000313|EMBL:EJN02748.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 315.0
  • Bit_score: 349
  • Evalue 5.20e-93
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 315.0
  • Bit_score: 334
  • Evalue 2.70e-89

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAGCGCCGAGCATCTCGACCGCGACGTGCAGTTCCGCGGCCTCTCGGCCGAGCAGCGCGAGCTCCTGATGATCCAGGTGGCCAAGCGCTACTACGAGCTCGACATGACCATGGGCGACCTCGCCAAGGAGCTCGGCCTGACGCGCTGGCAGGCGAGCCGCCTGCTCTCCGACGCGCGCGAGAGCGGCATCGTGCGCATCGAGATCGTGCCGCGCGCGCCGCGCAGCCCGGAGCTGGAGAGCCGGCTGCAGCGCCGCTTCGGCCTCAAGGATGCGGTGGTGGTGCCGCAGAGCCCCGAGGACGACGATGCGCTGCTGCTCGACAGCGTGGCCCAAGCGGCGGCGCGCCTGATCGCCGGGCTCGGCAAGGTGCCGCTGATCGGCGTCTCCTGGGGCCGCACCATGAGCGCCGTCGCCCGGCGCCTGCCGCCGTTCTGGAACGAGGGCGTGGAAGTGGTGCTGCTCAACGGCGCCATGAACATCCGCTCGCCCTCAACCCGCACCAACAACACGGCCGAGCTGTTCGCCCGCGCCGCCAACGGCATGGCGACACTGCTGCCGGTGCCGGCCATCCTGGGCCATGCCGCCACCCGCCTCGCCCTGGAGCAGGACCCGACCATCGCCGGCGTGCTGGCGCTCGGCCGGCGCGCGCCGGTGATCTGCTTCGGCATGGGCGCGGTCGCGCCGGATTCGGTGCTGGTGCAGTCGGGCTTCGTCTCCGAGGCGGAGCAGGCGCGGCTGCGCGCCAAGGGCGCGGTCGGCGACATCCTCAGCCGCTACATCGACGCCCAGGGCGCCATCGTCGACCCCGAGCTCGACGCCCGCACCATCGGCCTCGACCTGCGCTTCTGCGCCGAGCGCGAATTCTCCATCGGCGTCGCCGCCGGCCGCGCCAAGCACGCCATCGCCCTCGCCTGCCTGCGGGCCGGCTATCTCAACGTGCTGGTCACCGACGAGGAGACCGCGCTCTTCCTGCTGGACGAGACGCATCGGGGCTGA
PROTEIN sequence
Length: 333
MSAEHLDRDVQFRGLSAEQRELLMIQVAKRYYELDMTMGDLAKELGLTRWQASRLLSDARESGIVRIEIVPRAPRSPELESRLQRRFGLKDAVVVPQSPEDDDALLLDSVAQAAARLIAGLGKVPLIGVSWGRTMSAVARRLPPFWNEGVEVVLLNGAMNIRSPSTRTNNTAELFARAANGMATLLPVPAILGHAATRLALEQDPTIAGVLALGRRAPVICFGMGAVAPDSVLVQSGFVSEAEQARLRAKGAVGDILSRYIDAQGAIVDPELDARTIGLDLRFCAEREFSIGVAAGRAKHAIALACLRAGYLNVLVTDEETALFLLDETHRG*