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berkeley_reactor_200306_biofilm_scaffold_37757_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4247..5764)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate kinase n=1 Tax=Pseudomonas sp. Ag1 RepID=J1IHR9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 503.0
  • Bit_score: 570
  • Evalue 1.20e-159
Carbohydrate kinase {ECO:0000313|EMBL:EJF70862.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 503.0
  • Bit_score: 570
  • Evalue 1.70e-159
sugar kinase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 503.0
  • Bit_score: 567
  • Evalue 2.20e-159

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Taxonomy

Pseudomonas sp. Ag1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGACGCGTCTCCTCGGCCTCGACTTCGGCACCGGCGGCATCCGCGTCGGCGTGTTCGACCTCGCCGCGCGCGCCGTGCTCGGCGAGCGGGAGGAGCGCTATGCCACGGCCTACCCGCATCCGGGCTGGGCCGAGCAGTCGCCGACCGAGTGGTGGGAGGCGCTCGGCCGGGCGTGCCGCGCCCTGATGCGCGAGCTCGGCACGCCCGAGATCGCCGGGGTCTGCGTCGCCACCACCGCCTCCACCGTGGTCGCCTGCCGGCGCGACGGCACGCCGCTGCGCCCCGCCCTGCTGTGGATGGACTGCCGCGCCGCGCGCGAGGCGGATCGCACCGCCCGCGCGACGCATCCGGTGCTCGCCTATGCCGGCGGCGGCGACGCCGCGGAATGGCTGGTGCCGAAGGCGATGTGGCTCGCAGAGCACGAGCCGGAGGTCTATGCGCAGGCCGAGGTGATCTGCGAGTGCCTCGACTATGTCAACTTCATGCTGACGGGCCTGTGGGTCGGCTCGCGCATGAACGCCACCTGCAAGTGGAACTATGATTCGGTCGCCGGCCGCTTCCACGACGCGCTCTTCGACGAGCTCGGCGTGCCGGACCTGGCGGCCAGGCTGCCGGCCGAGATCCATGCCGTCGGCGCGCCGGTCGCGCCGGTGAGCGCCGCGGCGGCCGAGCATCTCGGCCTCGCCAACCGCCCGATCCTGGCGCAGGGCGGCATCGACGCGCATATCGGCATGGTCGGCGCCGGCACCATGGCGCCGGGCGAGCTCCTGATGATCGGCGGCACCTCGGTGGTGCATCTGTTCCAGCTGCCGGCGCAGGCGCCGGTCACCGGCTTCTGGGGCCCCTATCCCCATGCCCTGGTCGACGATCACTGGCTGGTCGAGGCCGGCCAGGTCTCGGCCGGCTCGGTGCTGTCCTGGTTCTCGGGCGAAGTGTTCCGCCTCGACGCCGCCGGCCTGGAGGCGCTGTGGCGGGAGGCGGAGGCGCTGCCGGTCGGCGGCGCGGGCCTGCTCACCCTCGACTATTTCATGGGCAATCGCACGCCCTATCGCGACCCGATGCTGCGCGGCGCCGTGCTCGGCCTGTCGCTGGGCCACGACCGGGCGGCGCTCTACCGCTCGGCCGTGGAGGGTGTGGCGCTCGCCTCCGCCAATGTGCTGAGGCGCATGGGCGAGCTCGGCGTCGCCTGCCGGCGCATCGTCAGCTCCGGCGGCTATGCCAGGAACCGGCTCTGGCTGCGCGCCACGGTGGACGCGATCGGCCGGCCGGTGGAGCTGATGCCCGAGGCCAACCTCACCATCATCGGCGCCGCGGCGAGCGCGGCGGCCGGGGCCGGGCTGGTGCCGGACCTCTTCGCCGCAGCCGCGGCGGTGGCCCAGCCCGCCATCACCGTCGAGCCCGACCTCGCCGCCCATGCGCGCTATGGCGAGCTCCTCGCCGACTATCTCGAGGCGACCAAGCTGCTGGCGCCGCTCTCCCGGCGCCTGGCGGCGCGCCAGCTCGGCGGCGCGGCATGA
PROTEIN sequence
Length: 506
MTRLLGLDFGTGGIRVGVFDLAARAVLGEREERYATAYPHPGWAEQSPTEWWEALGRACRALMRELGTPEIAGVCVATTASTVVACRRDGTPLRPALLWMDCRAAREADRTARATHPVLAYAGGGDAAEWLVPKAMWLAEHEPEVYAQAEVICECLDYVNFMLTGLWVGSRMNATCKWNYDSVAGRFHDALFDELGVPDLAARLPAEIHAVGAPVAPVSAAAAEHLGLANRPILAQGGIDAHIGMVGAGTMAPGELLMIGGTSVVHLFQLPAQAPVTGFWGPYPHALVDDHWLVEAGQVSAGSVLSWFSGEVFRLDAAGLEALWREAEALPVGGAGLLTLDYFMGNRTPYRDPMLRGAVLGLSLGHDRAALYRSAVEGVALASANVLRRMGELGVACRRIVSSGGYARNRLWLRATVDAIGRPVELMPEANLTIIGAAASAAAGAGLVPDLFAAAAAVAQPAITVEPDLAAHARYGELLADYLEATKLLAPLSRRLAARQLGGAA*