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berkeley_reactor_200306_biofilm_scaffold_46954_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10470..11885)

Top 3 Functional Annotations

Value Algorithm Source
Capsule polysaccharide biosynthesis protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LZQ9_METRJ similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 346
  • Evalue 3.40e-92
capsule polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 346
  • Evalue 9.60e-93
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACB22957.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 346
  • Evalue 4.80e-92

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Taxonomy

Methylobacterium radiotolerans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAGCGCGCTCTCCCTCCTGCTCGGTGCGGCCAAGGGCGCGAAGGCGGCGATGCTGGACGATGCCGGCAAGGCGCCGGCAGCCGAAAGGGACGGCGATGCTGCGCATCGGGCGTGGTCCAGGCGGTCCCATTTCCTCCTGCTGCAGTTCCCGTCGACGCCCTTCATCGCAACGCTCGGCAGGGAGCTGAAGCGGCGCGGCCACGGGGTGAGCCGCATCCGGCTGTGCATGGGCGACCGGCTGTTCTGGCCCGGCAAGGCGCACGACTATCGCGGCACGCCCGAGGGCTTCGAGGCGGAGATGCGCGAGCTGATCATGCGTCAGAGCGTGACCGACGTGCTGCTGTTCGGCGATTGCCGCCTCTATCACCAGTCCGCCATCCGCGCCTGCACGCAGACCGGCGCCCGGGTCCACGTGTTCGAGGAAGGCTATCTGAGGCCGTTCTGGATCACGCTCGAGGAGAACGGCACCAACGGCATGTCCGGCCTGCCGCGCGATCCCAAGAAGCTGCGCGAGCTCGCCAAGCGCCTCGGCGGCTATCAGGCGCCGGACGAGAGCATCACCGGCGGCGGCCGCCGGCGCTTCCTGTATGAGATCGCCACCTACACGCTGTCGCTGCTCGGGAACCGGTTCTATCCCCACTACCAGTTCCACCGGCCCTACCCGCCGATGGCCGAGTTCCGCTCATGGGGCTGGAAGCTGGCCAAGCGCCCGCTCGCCGCCCTGCACAGCCGCCGGTCGGAGGCGGCCCTGGCCGCCAGCGGCCGTCCCTTCTTCCTCCTGCCGCTGCAGCTCGACAGCGACTATCAGATCAAGGTCCATTCCGGCTTCGGCTCGATGCAGGCGGCGCTGCGGCATATCATGCAGGCCTTTGCCGCCGATGCGCCGCCGGAGCTGGCGCTCGTGGTGAAGCGCCATCCGCTCGACAACGGCATCGTCGACATGCGCCGCCTCACCGGCGCGATCGCGCGCGAGCTCGGCATTGCCGACCGCGTCTTCTTCGTCGACGGCGGCCATCTGCCGACCTTCCTGAAGATGGCGCGCGGGCTGGTGACGGTGAACAGCACCACCGGCCTGCAGGCGCTGCACCACGACTGCCCGATCATCGCCCTGGGCAACGCCATCTACGACATCCGGGGGCTCACCCATCAGGGCGGCCTCAAATCCTTCTGGACCGATCCGGCCAAGCCCGAGCACGGCCTCTACATCGCCTATCGCCGTGTCGTCATGCACCTCACCCAATGCAACGGCAACTACAACACCACCCGCGGCATCGCCCTCGGCGTGCGTCACATCGTCGGCCGTCTGGAGGGCGCCGGCGCCAGGGCGCCGGCTGCCATGGCGGCGGATGCCTCGGGCCTGTCCCTGATCGACGAGGCGCCGGACCTGCGGGTCGCGGCATCGCCGGCGGAATAG
PROTEIN sequence
Length: 472
MSALSLLLGAAKGAKAAMLDDAGKAPAAERDGDAAHRAWSRRSHFLLLQFPSTPFIATLGRELKRRGHGVSRIRLCMGDRLFWPGKAHDYRGTPEGFEAEMRELIMRQSVTDVLLFGDCRLYHQSAIRACTQTGARVHVFEEGYLRPFWITLEENGTNGMSGLPRDPKKLRELAKRLGGYQAPDESITGGGRRRFLYEIATYTLSLLGNRFYPHYQFHRPYPPMAEFRSWGWKLAKRPLAALHSRRSEAALAASGRPFFLLPLQLDSDYQIKVHSGFGSMQAALRHIMQAFAADAPPELALVVKRHPLDNGIVDMRRLTGAIARELGIADRVFFVDGGHLPTFLKMARGLVTVNSTTGLQALHHDCPIIALGNAIYDIRGLTHQGGLKSFWTDPAKPEHGLYIAYRRVVMHLTQCNGNYNTTRGIALGVRHIVGRLEGAGARAPAAMAADASGLSLIDEAPDLRVAASPAE*