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berkeley_reactor_200306_biofilm_scaffold_46954_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12542..13543)

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucuronate 5'-epimerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I5C6_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 333.0
  • Bit_score: 468
  • Evalue 5.50e-129
UDP-glucuronate 5-epimerase {ECO:0000313|EMBL:KKC34558.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 331.0
  • Bit_score: 479
  • Evalue 2.00e-132
UDP-glucuronate 5'-epimerase similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 333.0
  • Bit_score: 468
  • Evalue 1.60e-129

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Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGCGTTTTCTCGTCACCGGCACCGCCGGCTTTATCGGTTTTCATCTCGCCCGTCGCCTCCTGGCCGATGGCCATCTGGTCGCGGGCGTCGACGGCATGACGCCGTATTACGACGTGACGCTGAAGCAGGCGCGGCATGCCCTGCTCGGGCGCACCAACGCCTTCCAGGCCCACGCCATCATGCTCGAGGATGCCGAGGCGCTCGACCGCCTGGCGGAAGAGGCGCGCCCCGACGTGGTGATCCATCTCGCCGCCCAGGCCGGCGTGCGCTACAGCCTCGAGCACCCGCGCGCCTATGTCGACGCCAACCTCACCGGCACCTTCAACCTGATGGAGGTGGTCCGGCGGCTGCGTCCGCGGCATTTCCTGCTTGCCTCGACCAGCTCGGTCTACGGCGCCAACACGGTGATGCCGTTCCGCGAGACCGACCGGACCGACCACCCCCTGACCTTCTACGCCGCCACCAAGAAGGCGACCGAGGACATGGCGCATTCCTATGCGCATCTGTGGGACATCCCCACCACCGCCTTCCGCTTCTTCACGGTCTACGGCCCCTGGGGGCGGCCGGACATGGCGCTGTTCAAGTTCGTCAAGGCGGCGCTCGCCGGCGAGCCGATCGACGTCTACGGCCATGGCCAGATGCAGCGGGACTTCACCTATATCGACGACCTCGTCGAATCGATCGTGCGCCTGGTCGAGTGCGCGCCGGTGCGCGGCGAGCCGGTCGGGCCGCAGGACAGCCTCTCGCCCGCCGCTCCCTTCCGGGTCGTCAACATCGGCGGCGGCCAGCCGGTCGGGCTGATGGACTATATCGACGCGGTGGAGACGAGCCTCGGCCTCGCCATCCGGCGCAACATGCTGCCGATGCAGCAGGGCGACGTTCCCGCCACCTTCGCCGCGCCCGACCTCCTGCTGGCGCTCACCGGCCAGAAGCCGGAGACATCGATCGAGACCGGCGTCCGGGCCTTCGTCGACTGGTACCGCGACTATTATCGAGGCTGA
PROTEIN sequence
Length: 334
MRFLVTGTAGFIGFHLARRLLADGHLVAGVDGMTPYYDVTLKQARHALLGRTNAFQAHAIMLEDAEALDRLAEEARPDVVIHLAAQAGVRYSLEHPRAYVDANLTGTFNLMEVVRRLRPRHFLLASTSSVYGANTVMPFRETDRTDHPLTFYAATKKATEDMAHSYAHLWDIPTTAFRFFTVYGPWGRPDMALFKFVKAALAGEPIDVYGHGQMQRDFTYIDDLVESIVRLVECAPVRGEPVGPQDSLSPAAPFRVVNIGGGQPVGLMDYIDAVETSLGLAIRRNMLPMQQGDVPATFAAPDLLLALTGQKPETSIETGVRAFVDWYRDYYRG*