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berkeley_reactor_200306_biofilm_scaffold_58265_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20636..21127

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003800280 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 157.0
  • Bit_score: 175
  • Evalue 2.80e-41
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EMS40653.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 162.0
  • Bit_score: 162
  • Evalue 4.40e-37
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 162.0
  • Bit_score: 161
  • Evalue 1.20e-37

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Taxonomy

Methylobacterium mesophilicum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCGGCATCCGGCCTCGAAGACGATCGGCTACCAGCTGATCCATGTGACGCGCCTGCATCGTGCCCGAACGGCCAAGCTGCTGGAGGCGCTCGAACTTTTCCCCGGCCAGGAACAGGTGCTGGAAGCGTTGGCCGGGCGCGAGGCCATGTCGATGAGCGAGCTCGCCGACGTCCTGCGCGTGCGCCCGCCCACCGCTTCCAAGACCATCGCGCGCCTCTCCGCCGCGGGGCTGATCGAGCGCAAGGGCTCGGAAGGCGATGCCCGGGTCGTGCGCGTCGCCCTTACTGCCGAGGGGCGCCGCAAGGCGCAGGCGATCGAGGCCCTCTCCGTCGACATCGAGGACGAGGCGACGGCGCATCTCGACGGCAAGGACCGGCGCCGGCTGCGCAAGCTGCTCAAGCGGGTCGAGAAGGGCCTGCGCAACGCTCTCGGCGCCGAGATGGAGGAAGACGAGGACGGTGCCGAGGACGCCGAGGCGGACGACGCCTAG
PROTEIN sequence
Length: 164
MRHPASKTIGYQLIHVTRLHRARTAKLLEALELFPGQEQVLEALAGREAMSMSELADVLRVRPPTASKTIARLSAAGLIERKGSEGDARVVRVALTAEGRRKAQAIEALSVDIEDEATAHLDGKDRRRLRKLLKRVEKGLRNALGAEMEEDEDGAEDAEADDA*