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berkeley_reactor_200306_biofilm_scaffold_58265_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21316..22215)

Top 3 Functional Annotations

Value Algorithm Source
garR1; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 430
  • Evalue 2.50e-118
2-hydroxy-3-oxopropionate reductase GarR n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2K5_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 430
  • Evalue 8.70e-118
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KJB94799.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 297.0
  • Bit_score: 493
  • Evalue 2.00e-136

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGACCAAGGAACGCATCGGCTTCGTCGGCGTCGGGCTGATGGGCCACGGCATGGCAGGCAATATCGTCGACAAGGGCTTTCCACTGACCGTGGTCGGCCATCGCAACCGCGAGCCGGTGGAGGACCTCCTGGCGCGCGGCGCCGCCGAGGCCCATAGCGGCCGGGAGCTGGCGGAGAGGAGCGACATCGTCGTGCTCTGCGTCACCGGCTCGCCGCAGGTCGAGGCGGTGATCAACGGGCCGGAGGGCCTGGCCGCGGCCGGCAAGCCGCTGCTGATCTGCGACAGCTCCACCTCCGATCCCTCGGTGACCATCCGCCTGGCGGCCGAGCTCGCACCCAAGGGCATCACGCTGATCGACACACCGCTCGGCCGCACGCCGAAGGACGCGGCGGCCGGCACGCTCGACGTCATGGTCGGCGGCGCGCCGGAGGTGGTGGCGCGGGCGCGCCCGGTGCTGGAGGCCTTCGCCGGCCGTGTCATCCCGACCGGGCCGGTCGGCAGCGGCCACACCATGAAGCTGCTCAACAACTTCCTGTCGATGGGCTATGCCGCGCTCTATGCCGAGGCCCTGACCCTCGGCGTCAAGGCCGGGCTGACGCCGAAGACCTTCGACAGCGTCATCCGCGGCGGGCGCATGGATTGCGGCTTCTACCAGACCTTCTTCCAATGGGTGCTGGAGCGCGATCCCAACGCCCACAAGTTCACGCTCAGCAATGCCCTGAAGGACATGACCTATCTTGCCGGCTTCGCCAATGCGACGAGCACGGCCAATCCGATGGGCGCGGCGGTGCGCAATTCCTATGCCCTGGCCGCCGGCGCCGGGCGGGCGCAGGACTATGTGCCGATGCTGTCCGACGTGGTTGCCGAGCTGAACGGGGTATCGCTCACCGGAAACTAA
PROTEIN sequence
Length: 300
MTKERIGFVGVGLMGHGMAGNIVDKGFPLTVVGHRNREPVEDLLARGAAEAHSGRELAERSDIVVLCVTGSPQVEAVINGPEGLAAAGKPLLICDSSTSDPSVTIRLAAELAPKGITLIDTPLGRTPKDAAAGTLDVMVGGAPEVVARARPVLEAFAGRVIPTGPVGSGHTMKLLNNFLSMGYAALYAEALTLGVKAGLTPKTFDSVIRGGRMDCGFYQTFFQWVLERDPNAHKFTLSNALKDMTYLAGFANATSTANPMGAAVRNSYALAAGAGRAQDYVPMLSDVVAELNGVSLTGN*