ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_66949_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9859..10161)

Top 3 Functional Annotations

Value Algorithm Source
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2N567_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 89.0
  • Bit_score: 97
  • Evalue 7.60e-18
Uncharacterized protein {ECO:0000313|EMBL:KEQ06681.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 89.0
  • Bit_score: 110
  • Evalue 1.20e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 91
  • Evalue 9.10e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGACCGACACCCCTTCCGCCCTGCGCAGCGCCGCGGACGTCGCCACGCCCAACGCCTCGCGCCACCTGCAGCAGCTCTGCAAGCATTTCGGGCACCGGCGCCCGGTCACCTTCGACGAGCACGCCGGCCGCATCGGCTTCGAGATCGGCGACTGCGACCTTGCGGCCGCCGACGGCGTGCTCCACATCGCGCTCGCCTCTCCGGGCGAGGAGCAGATGGCGCAGCTCCAGGACGTGGTGGCGCGCCATCTCCTGCGCTTCGCCTTCCGCGAGGAGCTGCAGATCGACTGGCGGCCGGCCTGA
PROTEIN sequence
Length: 101
MTDTPSALRSAADVATPNASRHLQQLCKHFGHRRPVTFDEHAGRIGFEIGDCDLAAADGVLHIALASPGEEQMAQLQDVVARHLLRFAFREELQIDWRPA*